Module Hierarchy

Scientific: ScientificPython is a collection of Python modules that are useful for scientific computing.
- Scientific.BSP: High-level parallelization constructs based on the Bulk Synchronous Parallel (BSP) model.
  - Scientific.BSP.Console: Interactive console for parallel computing
  - Scientific.BSP.IO: Parallel acces to netCDF files
- Scientific.Clustering
  - Scientific.Clustering.AffinityPropagation: Clustering by Affinity Propagation
- Scientific.DictWithDefault: Dictionary with default values
- Scientific.DistributedComputing
  - Scientific.DistributedComputing.MasterSlave: Distributed computing using a master-slave model
  - Scientific.DistributedComputing.TaskManager
- Scientific.FFT
- Scientific.Functions
  - Scientific.Functions.Derivatives: Automatic differentiation for functions of any number of variables up to any order
  - Scientific.Functions.FindRoot: Newton-Raphson for numerical root finding
  - Scientific.Functions.FirstDerivatives: Automatic differentiation for functions with any number of variables
  - Scientific.Functions.Interpolation: Interpolation of functions defined on a grid
  - Scientific.Functions.LeastSquares: Non-linear least squares fitting
  - Scientific.Functions.Polynomial: Polynomials in any number of variables
  - Scientific.Functions.Rational: Rational functions in one variable
  - Scientific.Functions.Romberg: Numerical integration using the Romberg algorithm
- Scientific.Geometry: Geometrical quantities and objects
  - Scientific.Geometry.Objects3D: Geometrical objects in 3D space
  - Scientific.Geometry.Quaternion: Quaternions as representations of rotations in 3D space
  - Scientific.Geometry.TensorAnalysis: Vector and tensor fields with derivatives
  - Scientific.Geometry.Transformation: Linear transformations in 3D space
- Scientific.IO
  - Scientific.IO.ArrayIO: Basic support for I/O of one- and two-dimensional numerical arrays to and from plain text files
  - Scientific.IO.FortranFormat: Fortran-style formatted input/output
  - Scientific.IO.NetCDF: Python interface to the netCDF library
  - Scientific.IO.PDB: Parsing and writing of Protein Data Bank (PDB) files
  - Scientific.IO.PDBSpaceGroups
  - Scientific.IO.TextFile: Text files with line iteration and transparent compression
- Scientific.MPI: Python interface to the Message Passing Interface (MPI)
  - Scientific.MPI.IO: I/O utilities for use with MPI programs
- Scientific.NRNG
- Scientific.NumberDict: Dictionary storing numerical values
- Scientific.Physics
  - Scientific.Physics.PhysicalQuantities: Physical quantities with units.
  - Scientific.Physics.Potential: Potential energy functions with automatic gradient evaluation
- Scientific.QtWidgets
  - Scientific.QtWidgets.QtPlotCanvas: Plot widget for Qt user interfaces
  - Scientific.QtWidgets.QtVisualizationCanvas: 3D wireframe canvas widget for Qt
- Scientific.Signals
  - Scientific.Signals.Models: Auto-regressive model for stochastic processes
- Scientific.Statistics: Basic monovariate statistics
  - Scientific.Statistics.Histogram: Standard and weighted histograms
- Scientific.Threading
  - Scientific.Threading.TaskManager: Parallel task manager for shared-memory multiprocessor machines
- Scientific.TkWidgets
  - Scientific.TkWidgets.TkPlotCanvas: Plot widget for Tk user interfaces
  - Scientific.TkWidgets.TkVisualizationCanvas: 3D wireframe canvas widget for Tk
- Scientific.Visualization: Scientific visualization
  - Scientific.Visualization.Color: Color definitions for use in the modules VRML, VRML2, VMD, and PyMOL.
  - Scientific.Visualization.PyMOL: Definitions of simple 3D graphics objects and scenes containing them, in a form that can be fed to the molecular visualization program PyMOL
  - Scientific.Visualization.VMD: Definitions of simple 3D graphics objects and scenes containing them, in a form that can be fed to the molecular visualization program VMD
  - Scientific.Visualization.VPython: Definitions of simple 3D graphics objects and scenes containing them, to be rendered using VPython
  - Scientific.Visualization.VRML: Definitions of simple 3D graphics objects and VRML scenes containing them
  - Scientific.Visualization.VRML2: Definitions of simple 3D graphics objects and VRML scenes containing them
- Scientific.indexing: Array indexing utility