7dbd17a5aa
Former-commit-id:133dc97f67[formerlya02aeb236c] [formerly9f19e3f712] [formerly133dc97f67[formerlya02aeb236c] [formerly9f19e3f712] [formerly06a8b51d6d[formerly9f19e3f712[formerly 64fa9254b946eae7e61bbc3f513b7c3696c4f54f]]]] Former-commit-id:06a8b51d6dFormer-commit-id:9bb8decbcf[formerly8e80217e59] [formerly377dcd10b9[formerly3360eb6c5f]] Former-commit-id:377dcd10b9Former-commit-id:e2ecdcfe33
4797 lines
199 KiB
C
Executable file
4797 lines
199 KiB
C
Executable file
/* Generated by Cython 0.12 on Sun Mar 14 21:50:07 2010 */
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#define PY_SSIZE_T_CLEAN
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#include "Python.h"
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#include "structmember.h"
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#ifndef Py_PYTHON_H
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#error Python headers needed to compile C extensions, please install development version of Python.
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#else
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#ifndef PY_LONG_LONG
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#define PY_LONG_LONG LONG_LONG
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#endif
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#ifndef DL_EXPORT
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#define DL_EXPORT(t) t
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#endif
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#if PY_VERSION_HEX < 0x02040000
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#define METH_COEXIST 0
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#define PyDict_CheckExact(op) (Py_TYPE(op) == &PyDict_Type)
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#define PyDict_Contains(d,o) PySequence_Contains(d,o)
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#endif
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#if PY_VERSION_HEX < 0x02050000
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typedef int Py_ssize_t;
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#define PY_SSIZE_T_MAX INT_MAX
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#define PY_SSIZE_T_MIN INT_MIN
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#define PY_FORMAT_SIZE_T ""
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#define PyInt_FromSsize_t(z) PyInt_FromLong(z)
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#define PyInt_AsSsize_t(o) PyInt_AsLong(o)
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#define PyNumber_Index(o) PyNumber_Int(o)
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#define PyIndex_Check(o) PyNumber_Check(o)
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#endif
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#if PY_VERSION_HEX < 0x02060000
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#define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
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#define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
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#define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
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#define PyVarObject_HEAD_INIT(type, size) \
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PyObject_HEAD_INIT(type) size,
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#define PyType_Modified(t)
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typedef struct {
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void *buf;
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PyObject *obj;
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Py_ssize_t len;
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Py_ssize_t itemsize;
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int readonly;
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int ndim;
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char *format;
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Py_ssize_t *shape;
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Py_ssize_t *strides;
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Py_ssize_t *suboffsets;
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void *internal;
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} Py_buffer;
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#define PyBUF_SIMPLE 0
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#define PyBUF_WRITABLE 0x0001
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#define PyBUF_FORMAT 0x0004
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#define PyBUF_ND 0x0008
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#define PyBUF_STRIDES (0x0010 | PyBUF_ND)
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#define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
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#define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
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#define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
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#define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
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#endif
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#if PY_MAJOR_VERSION < 3
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#define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
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#else
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#define __Pyx_BUILTIN_MODULE_NAME "builtins"
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define Py_TPFLAGS_CHECKTYPES 0
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#define Py_TPFLAGS_HAVE_INDEX 0
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#endif
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#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
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#define Py_TPFLAGS_HAVE_NEWBUFFER 0
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define PyBaseString_Type PyUnicode_Type
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#define PyString_Type PyUnicode_Type
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#define PyString_CheckExact PyUnicode_CheckExact
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#else
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#define PyBytes_Type PyString_Type
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#define PyBytes_CheckExact PyString_CheckExact
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define PyInt_Type PyLong_Type
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#define PyInt_Check(op) PyLong_Check(op)
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#define PyInt_CheckExact(op) PyLong_CheckExact(op)
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#define PyInt_FromString PyLong_FromString
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#define PyInt_FromUnicode PyLong_FromUnicode
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#define PyInt_FromLong PyLong_FromLong
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#define PyInt_FromSize_t PyLong_FromSize_t
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#define PyInt_FromSsize_t PyLong_FromSsize_t
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#define PyInt_AsLong PyLong_AsLong
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#define PyInt_AS_LONG PyLong_AS_LONG
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#define PyInt_AsSsize_t PyLong_AsSsize_t
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#define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
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#define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
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#define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y)
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#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y)
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#else
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#define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y)
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#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y)
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#endif
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#if PY_MAJOR_VERSION >= 3
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#define PyMethod_New(func, self, klass) PyInstanceMethod_New(func)
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#endif
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#if !defined(WIN32) && !defined(MS_WINDOWS)
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#ifndef __stdcall
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#define __stdcall
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#endif
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#ifndef __cdecl
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#define __cdecl
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#endif
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#ifndef __fastcall
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#define __fastcall
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#endif
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#else
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#define _USE_MATH_DEFINES
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#endif
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#if PY_VERSION_HEX < 0x02050000
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#define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),((char *)(n)))
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#define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),((char *)(n)),(a))
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#define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),((char *)(n)))
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#else
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#define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),(n))
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#define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),(n),(a))
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#define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),(n))
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#endif
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#if PY_VERSION_HEX < 0x02050000
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#define __Pyx_NAMESTR(n) ((char *)(n))
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#define __Pyx_DOCSTR(n) ((char *)(n))
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#else
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#define __Pyx_NAMESTR(n) (n)
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#define __Pyx_DOCSTR(n) (n)
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#endif
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#ifdef __cplusplus
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#define __PYX_EXTERN_C extern "C"
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#else
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#define __PYX_EXTERN_C extern
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#endif
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#include <math.h>
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#define __PYX_HAVE_API__h5py__h5d
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#include "stdlib.h"
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#include "string.h"
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#include "time.h"
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#include "unistd.h"
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#include "stdint.h"
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#include "compat.h"
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#include "lzf_filter.h"
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#include "hdf5.h"
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#include "numpy/arrayobject.h"
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#ifdef __GNUC__
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#define INLINE __inline__
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#elif _WIN32
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#define INLINE __inline
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#else
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#define INLINE
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#endif
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typedef struct {PyObject **p; char *s; const long n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; /*proto*/
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/* Type Conversion Predeclarations */
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#if PY_MAJOR_VERSION < 3
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#define __Pyx_PyBytes_FromString PyString_FromString
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#define __Pyx_PyBytes_FromStringAndSize PyString_FromStringAndSize
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#define __Pyx_PyBytes_AsString PyString_AsString
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#else
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#define __Pyx_PyBytes_FromString PyBytes_FromString
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#define __Pyx_PyBytes_FromStringAndSize PyBytes_FromStringAndSize
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#define __Pyx_PyBytes_AsString PyBytes_AsString
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#endif
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#define __Pyx_PyBytes_FromUString(s) __Pyx_PyBytes_FromString((char*)s)
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#define __Pyx_PyBytes_AsUString(s) ((unsigned char*) __Pyx_PyBytes_AsString(s))
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#define __Pyx_PyBool_FromLong(b) ((b) ? (Py_INCREF(Py_True), Py_True) : (Py_INCREF(Py_False), Py_False))
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static INLINE int __Pyx_PyObject_IsTrue(PyObject*);
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static INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x);
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#if !defined(T_PYSSIZET)
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#if PY_VERSION_HEX < 0x02050000
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#define T_PYSSIZET T_INT
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#elif !defined(T_LONGLONG)
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#define T_PYSSIZET \
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((sizeof(Py_ssize_t) == sizeof(int)) ? T_INT : \
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((sizeof(Py_ssize_t) == sizeof(long)) ? T_LONG : -1))
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#else
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#define T_PYSSIZET \
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((sizeof(Py_ssize_t) == sizeof(int)) ? T_INT : \
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((sizeof(Py_ssize_t) == sizeof(long)) ? T_LONG : \
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((sizeof(Py_ssize_t) == sizeof(PY_LONG_LONG)) ? T_LONGLONG : -1)))
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#endif
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#endif
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#if !defined(T_ULONGLONG)
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#define __Pyx_T_UNSIGNED_INT(x) \
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((sizeof(x) == sizeof(unsigned char)) ? T_UBYTE : \
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((sizeof(x) == sizeof(unsigned short)) ? T_USHORT : \
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((sizeof(x) == sizeof(unsigned int)) ? T_UINT : \
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((sizeof(x) == sizeof(unsigned long)) ? T_ULONG : -1))))
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#else
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#define __Pyx_T_UNSIGNED_INT(x) \
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((sizeof(x) == sizeof(unsigned char)) ? T_UBYTE : \
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((sizeof(x) == sizeof(unsigned short)) ? T_USHORT : \
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((sizeof(x) == sizeof(unsigned int)) ? T_UINT : \
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((sizeof(x) == sizeof(unsigned long)) ? T_ULONG : \
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((sizeof(x) == sizeof(unsigned PY_LONG_LONG)) ? T_ULONGLONG : -1)))))
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#endif
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#if !defined(T_LONGLONG)
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#define __Pyx_T_SIGNED_INT(x) \
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((sizeof(x) == sizeof(char)) ? T_BYTE : \
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((sizeof(x) == sizeof(short)) ? T_SHORT : \
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((sizeof(x) == sizeof(int)) ? T_INT : \
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((sizeof(x) == sizeof(long)) ? T_LONG : -1))))
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#else
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#define __Pyx_T_SIGNED_INT(x) \
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((sizeof(x) == sizeof(char)) ? T_BYTE : \
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((sizeof(x) == sizeof(short)) ? T_SHORT : \
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((sizeof(x) == sizeof(int)) ? T_INT : \
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((sizeof(x) == sizeof(long)) ? T_LONG : \
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((sizeof(x) == sizeof(PY_LONG_LONG)) ? T_LONGLONG : -1)))))
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#endif
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#define __Pyx_T_FLOATING(x) \
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((sizeof(x) == sizeof(float)) ? T_FLOAT : \
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((sizeof(x) == sizeof(double)) ? T_DOUBLE : -1))
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#if !defined(T_SIZET)
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#if !defined(T_ULONGLONG)
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#define T_SIZET \
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((sizeof(size_t) == sizeof(unsigned int)) ? T_UINT : \
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((sizeof(size_t) == sizeof(unsigned long)) ? T_ULONG : -1))
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#else
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#define T_SIZET \
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((sizeof(size_t) == sizeof(unsigned int)) ? T_UINT : \
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((sizeof(size_t) == sizeof(unsigned long)) ? T_ULONG : \
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((sizeof(size_t) == sizeof(unsigned PY_LONG_LONG)) ? T_ULONGLONG : -1)))
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#endif
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#endif
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static INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*);
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static INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t);
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static INLINE size_t __Pyx_PyInt_AsSize_t(PyObject*);
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#define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x))
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#ifdef __GNUC__
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/* Test for GCC > 2.95 */
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#if __GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95))
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#define likely(x) __builtin_expect(!!(x), 1)
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#define unlikely(x) __builtin_expect(!!(x), 0)
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#else /* __GNUC__ > 2 ... */
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#define likely(x) (x)
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#define unlikely(x) (x)
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#endif /* __GNUC__ > 2 ... */
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#else /* __GNUC__ */
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#define likely(x) (x)
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#define unlikely(x) (x)
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#endif /* __GNUC__ */
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static PyObject *__pyx_m;
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static PyObject *__pyx_b;
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static PyObject *__pyx_empty_tuple;
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static PyObject *__pyx_empty_bytes;
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static int __pyx_lineno;
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static int __pyx_clineno = 0;
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static const char * __pyx_cfilenm= __FILE__;
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static const char *__pyx_filename;
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static const char **__pyx_f;
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/* Type declarations */
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/* "/home/tachyon/slave/unix-release/build/h5py/utils.pxd":20
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* cdef void efree(void* ptr)
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*
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* cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
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* cpdef int check_numpy_write(ndarray arr, hid_t space_id=*) except -1
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*
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*/
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struct __pyx_opt_args_4h5py_5utils_check_numpy_read {
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int __pyx_n;
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hid_t space_id;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/utils.pxd":21
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*
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* cpdef int check_numpy_read(ndarray arr, hid_t space_id=*) except -1
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* cpdef int check_numpy_write(ndarray arr, hid_t space_id=*) except -1 # <<<<<<<<<<<<<<
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*
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* cdef int convert_tuple(object tuple, hsize_t *dims, hsize_t rank) except -1
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*/
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struct __pyx_opt_args_4h5py_5utils_check_numpy_write {
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int __pyx_n;
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hid_t space_id;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":72
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*
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* cdef TypeID typewrap(hid_t id_)
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* cpdef TypeID py_create(object dtype, bint logical=*) # <<<<<<<<<<<<<<
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*
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*
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*/
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struct __pyx_opt_args_4h5py_3h5t_py_create {
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int __pyx_n;
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int logical;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5.pxd":28
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* cpdef H5PYConfig get_config()
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*
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* cdef class ObjectID: # <<<<<<<<<<<<<<
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*
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* cdef object __weakref__
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*/
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struct __pyx_obj_4h5py_2h5_ObjectID {
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PyObject_HEAD
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PyObject *__weakref__;
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hid_t id;
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int _locked;
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PyObject *_hash;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":23
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* # --- Base classes ---
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*
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* cdef class PropID(ObjectID): # <<<<<<<<<<<<<<
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* """ Base class for all property lists """
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* pass
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*/
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struct __pyx_obj_4h5py_3h5p_PropID {
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struct __pyx_obj_4h5py_2h5_ObjectID __pyx_base;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":33
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* pass
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*
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* cdef class PropInstanceID(PropID): # <<<<<<<<<<<<<<
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* """ Represents an instance of a property list class (i.e. an actual list
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* which can be passed on to other API functions).
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*/
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struct __pyx_obj_4h5py_3h5p_PropInstanceID {
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struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":62
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* # --- Object access ---
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*
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* cdef class PropFAID(PropInstanceID): # <<<<<<<<<<<<<<
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* """ File access property list """
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* pass
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*/
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struct __pyx_obj_4h5py_3h5p_PropFAID {
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struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":17
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* from h5 cimport class ObjectID
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*
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* cdef class TypeID(ObjectID): # <<<<<<<<<<<<<<
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*
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* cdef object py_dtype(self)
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*/
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struct __pyx_obj_4h5py_3h5t_TypeID {
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struct __pyx_obj_4h5py_2h5_ObjectID __pyx_base;
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struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtab;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":40
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* pass
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*
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* cdef class TypeBitfieldID(TypeID): # <<<<<<<<<<<<<<
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* pass
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*
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*/
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struct __pyx_obj_4h5py_3h5t_TypeBitfieldID {
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struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":39
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* pass
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*
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* cdef class PropCreateID(PropInstanceID): # <<<<<<<<<<<<<<
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* """ Base class for all object creation lists.
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*
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*/
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struct __pyx_obj_4h5py_3h5p_PropCreateID {
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struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":55
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* pass
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*
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* cdef class PropFCID(PropCreateID): # <<<<<<<<<<<<<<
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* """ File creation property list """
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* pass
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*/
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struct __pyx_obj_4h5py_3h5p_PropFCID {
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struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
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};
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/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":27
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* pass
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*
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* cdef class PropClassID(PropID): # <<<<<<<<<<<<<<
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* """ Represents an HDF5 property list class. These can be either (locked)
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* library-defined classes or user-created classes.
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*/
|
|
|
|
struct __pyx_obj_4h5py_3h5p_PropClassID {
|
|
struct __pyx_obj_4h5py_3h5p_PropID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":59
|
|
* # --- Enums & compound types ---
|
|
*
|
|
* cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeCompositeID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":66
|
|
* cdef int enum_convert(self, long long *buf, int reverse) except -1
|
|
*
|
|
* cdef class TypeCompoundID(TypeCompositeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeCompoundID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":33
|
|
* pass
|
|
*
|
|
* cdef class TypeVlenID(TypeID): # <<<<<<<<<<<<<<
|
|
* # Non-string vlens
|
|
* pass
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeVlenID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":51
|
|
* # --- Object creation ---
|
|
*
|
|
* cdef class PropDCID(PropCreateID): # <<<<<<<<<<<<<<
|
|
* """ Dataset creation property list """
|
|
* pass
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5p_PropDCID {
|
|
struct __pyx_obj_4h5py_3h5p_PropCreateID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":37
|
|
* pass
|
|
*
|
|
* cdef class TypeTimeID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeTimeID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":23
|
|
* # --- Top-level classes ---
|
|
*
|
|
* cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeArrayID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":48
|
|
* # --- Numeric atomic types ---
|
|
*
|
|
* cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeAtomicID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":54
|
|
* pass
|
|
*
|
|
* cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeFloatID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":29
|
|
* pass
|
|
*
|
|
* cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
|
|
* # Both vlen and fixed-len strings
|
|
* pass
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeStringID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":26
|
|
* pass
|
|
*
|
|
* cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeOpaqueID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":62
|
|
* pass
|
|
*
|
|
* cdef class TypeEnumID(TypeCompositeID): # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef int enum_convert(self, long long *buf, int reverse) except -1
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeEnumID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeCompositeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5.pxd":15
|
|
* include "defs.pxd"
|
|
*
|
|
* cdef class H5PYConfig: # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef object _r_name
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_2h5_H5PYConfig {
|
|
PyObject_HEAD
|
|
PyObject *_r_name;
|
|
PyObject *_i_name;
|
|
PyObject *_f_name;
|
|
PyObject *_t_name;
|
|
PyObject *API_16;
|
|
PyObject *API_18;
|
|
PyObject *DEBUG;
|
|
PyObject *THREADS;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":46
|
|
* pass
|
|
*
|
|
* cdef class PropCopyID(PropInstanceID): # <<<<<<<<<<<<<<
|
|
* """ Property list for copying objects (as in h5o.copy) """
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5p_PropCopyID {
|
|
struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":51
|
|
* pass
|
|
*
|
|
* cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeIntegerID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeAtomicID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":43
|
|
* pass
|
|
*
|
|
* cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5t_TypeReferenceID {
|
|
struct __pyx_obj_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5p.pxd":66
|
|
* pass
|
|
*
|
|
* cdef class PropDXID(PropInstanceID): # <<<<<<<<<<<<<<
|
|
* """ Dataset transfer property list """
|
|
* pass
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5p_PropDXID {
|
|
struct __pyx_obj_4h5py_3h5p_PropInstanceID __pyx_base;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pxd":17
|
|
* from h5 cimport ObjectID
|
|
*
|
|
* cdef class DatasetID(ObjectID): # <<<<<<<<<<<<<<
|
|
* cdef object _dtype
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5d_DatasetID {
|
|
struct __pyx_obj_4h5py_2h5_ObjectID __pyx_base;
|
|
PyObject *_dtype;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5.pxd":35
|
|
* cdef object _hash
|
|
*
|
|
* cdef class SmartStruct: # <<<<<<<<<<<<<<
|
|
* cdef object __weakref__
|
|
* cdef object _title
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_2h5_SmartStruct {
|
|
PyObject_HEAD
|
|
PyObject *__weakref__;
|
|
PyObject *_title;
|
|
};
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5s.pxd":17
|
|
* from h5 cimport class ObjectID
|
|
*
|
|
* cdef class SpaceID(ObjectID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_obj_4h5py_3h5s_SpaceID {
|
|
struct __pyx_obj_4h5py_2h5_ObjectID __pyx_base;
|
|
};
|
|
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID {
|
|
PyObject *(*py_dtype)(struct __pyx_obj_4h5py_3h5t_TypeID *);
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeID *__pyx_vtabptr_4h5py_3h5t_TypeID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":59
|
|
* # --- Enums & compound types ---
|
|
*
|
|
* cdef class TypeCompositeID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID *__pyx_vtabptr_4h5py_3h5t_TypeCompositeID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":66
|
|
* cdef int enum_convert(self, long long *buf, int reverse) except -1
|
|
*
|
|
* cdef class TypeCompoundID(TypeCompositeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeCompoundID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeCompoundID *__pyx_vtabptr_4h5py_3h5t_TypeCompoundID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":26
|
|
* pass
|
|
*
|
|
* cdef class TypeOpaqueID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeOpaqueID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeOpaqueID *__pyx_vtabptr_4h5py_3h5t_TypeOpaqueID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":23
|
|
* # --- Top-level classes ---
|
|
*
|
|
* cdef class TypeArrayID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeArrayID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeArrayID *__pyx_vtabptr_4h5py_3h5t_TypeArrayID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":48
|
|
* # --- Numeric atomic types ---
|
|
*
|
|
* cdef class TypeAtomicID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID *__pyx_vtabptr_4h5py_3h5t_TypeAtomicID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":51
|
|
* pass
|
|
*
|
|
* cdef class TypeIntegerID(TypeAtomicID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeIntegerID *__pyx_vtabptr_4h5py_3h5t_TypeIntegerID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":43
|
|
* pass
|
|
*
|
|
* cdef class TypeReferenceID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeReferenceID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeReferenceID *__pyx_vtabptr_4h5py_3h5t_TypeReferenceID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":29
|
|
* pass
|
|
*
|
|
* cdef class TypeStringID(TypeID): # <<<<<<<<<<<<<<
|
|
* # Both vlen and fixed-len strings
|
|
* pass
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeStringID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeStringID *__pyx_vtabptr_4h5py_3h5t_TypeStringID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":54
|
|
* pass
|
|
*
|
|
* cdef class TypeFloatID(TypeAtomicID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeFloatID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeAtomicID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeFloatID *__pyx_vtabptr_4h5py_3h5t_TypeFloatID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":37
|
|
* pass
|
|
*
|
|
* cdef class TypeTimeID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeTimeID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeTimeID *__pyx_vtabptr_4h5py_3h5t_TypeTimeID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":40
|
|
* pass
|
|
*
|
|
* cdef class TypeBitfieldID(TypeID): # <<<<<<<<<<<<<<
|
|
* pass
|
|
*
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeBitfieldID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeBitfieldID *__pyx_vtabptr_4h5py_3h5t_TypeBitfieldID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":33
|
|
* pass
|
|
*
|
|
* cdef class TypeVlenID(TypeID): # <<<<<<<<<<<<<<
|
|
* # Non-string vlens
|
|
* pass
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeVlenID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeID __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeVlenID *__pyx_vtabptr_4h5py_3h5t_TypeVlenID;
|
|
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5t.pxd":62
|
|
* pass
|
|
*
|
|
* cdef class TypeEnumID(TypeCompositeID): # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef int enum_convert(self, long long *buf, int reverse) except -1
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeEnumID {
|
|
struct __pyx_vtabstruct_4h5py_3h5t_TypeCompositeID __pyx_base;
|
|
int (*enum_convert)(struct __pyx_obj_4h5py_3h5t_TypeEnumID *, PY_LONG_LONG *, int);
|
|
};
|
|
static struct __pyx_vtabstruct_4h5py_3h5t_TypeEnumID *__pyx_vtabptr_4h5py_3h5t_TypeEnumID;
|
|
|
|
#ifndef CYTHON_REFNANNY
|
|
#define CYTHON_REFNANNY 0
|
|
#endif
|
|
|
|
#if CYTHON_REFNANNY
|
|
typedef struct {
|
|
void (*INCREF)(void*, PyObject*, int);
|
|
void (*DECREF)(void*, PyObject*, int);
|
|
void (*GOTREF)(void*, PyObject*, int);
|
|
void (*GIVEREF)(void*, PyObject*, int);
|
|
void* (*SetupContext)(const char*, int, const char*);
|
|
void (*FinishContext)(void**);
|
|
} __Pyx_RefNannyAPIStruct;
|
|
static __Pyx_RefNannyAPIStruct *__Pyx_RefNanny = NULL;
|
|
static __Pyx_RefNannyAPIStruct * __Pyx_RefNannyImportAPI(const char *modname) {
|
|
PyObject *m = NULL, *p = NULL;
|
|
void *r = NULL;
|
|
m = PyImport_ImportModule((char *)modname);
|
|
if (!m) goto end;
|
|
p = PyObject_GetAttrString(m, (char *)"RefNannyAPI");
|
|
if (!p) goto end;
|
|
r = PyLong_AsVoidPtr(p);
|
|
end:
|
|
Py_XDECREF(p);
|
|
Py_XDECREF(m);
|
|
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#define __Pyx_GOTREF(r)
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#endif /* CYTHON_REFNANNY */
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#define __Pyx_XGOTREF(r) do { if((r) != NULL) {__Pyx_GOTREF(r);} } while(0)
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static void __Pyx_RaiseDoubleKeywordsError(
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const char* func_name, PyObject* kw_name); /*proto*/
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static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact,
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Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); /*proto*/
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static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[], PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, const char* function_name); /*proto*/
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static INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); /*proto*/
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static INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); /*proto*/
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|
static INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); /*proto*/
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|
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|
static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
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const char *name, int exact); /*proto*/
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static INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t);
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|
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|
static PyObject *__Pyx_GetName(PyObject *dict, PyObject *name); /*proto*/
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|
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|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb); /*proto*/
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static INLINE PyObject *__Pyx_PyInt_to_py_haddr_t(haddr_t);
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static INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t);
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static INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject *);
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static INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject *);
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static INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject *);
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static INLINE char __Pyx_PyInt_AsChar(PyObject *);
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static INLINE short __Pyx_PyInt_AsShort(PyObject *);
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static INLINE int __Pyx_PyInt_AsInt(PyObject *);
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static INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject *);
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static INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject *);
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static INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject *);
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static INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject *);
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static INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject *);
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static INLINE long __Pyx_PyInt_AsLong(PyObject *);
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static INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject *);
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static INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject *);
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|
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|
static INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject *);
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|
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|
static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, long size); /*proto*/
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|
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|
static PyObject *__Pyx_ImportModule(const char *name); /*proto*/
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|
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|
static int __Pyx_GetVtable(PyObject *dict, void *vtabptr); /*proto*/
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|
|
|
static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig); /*proto*/
|
|
|
|
static void __Pyx_AddTraceback(const char *funcname); /*proto*/
|
|
|
|
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); /*proto*/
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|
/* Module declarations from h5py.h5 */
|
|
|
|
static PyTypeObject *__pyx_ptype_4h5py_2h5_H5PYConfig = 0;
|
|
static PyTypeObject *__pyx_ptype_4h5py_2h5_ObjectID = 0;
|
|
static PyTypeObject *__pyx_ptype_4h5py_2h5_SmartStruct = 0;
|
|
static struct __pyx_obj_4h5py_2h5_H5PYConfig *(*__pyx_f_4h5py_2h5_get_config)(int __pyx_skip_dispatch); /*proto*/
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|
static int (*__pyx_f_4h5py_2h5_init_hdf5)(void); /*proto*/
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|
/* Module declarations from numpy */
|
|
|
|
/* Module declarations from h5py.numpy */
|
|
|
|
static PyTypeObject *__pyx_ptype_4h5py_5numpy_dtype = 0;
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|
static PyTypeObject *__pyx_ptype_4h5py_5numpy_ndarray = 0;
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/* Module declarations from h5py.utils */
|
|
|
|
static void *(*__pyx_f_4h5py_5utils_emalloc)(size_t); /*proto*/
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|
static void (*__pyx_f_4h5py_5utils_efree)(void *); /*proto*/
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|
static int (*__pyx_f_4h5py_5utils_check_numpy_read)(PyArrayObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_5utils_check_numpy_read *__pyx_optional_args); /*proto*/
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|
static int (*__pyx_f_4h5py_5utils_check_numpy_write)(PyArrayObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_5utils_check_numpy_write *__pyx_optional_args); /*proto*/
|
|
static int (*__pyx_f_4h5py_5utils_convert_tuple)(PyObject *, hsize_t *, hsize_t); /*proto*/
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static PyObject *(*__pyx_f_4h5py_5utils_convert_dims)(hsize_t *, hsize_t); /*proto*/
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|
static int (*__pyx_f_4h5py_5utils_require_tuple)(PyObject *, int, int, char *); /*proto*/
|
|
static PyObject *(*__pyx_f_4h5py_5utils_create_numpy_hsize)(int, hsize_t *); /*proto*/
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static PyObject *(*__pyx_f_4h5py_5utils_create_hsize_array)(PyObject *); /*proto*/
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/* Module declarations from h5py.h5t */
|
|
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeID = 0;
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeArrayID = 0;
|
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeOpaqueID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeStringID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeVlenID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeTimeID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeBitfieldID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeReferenceID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeAtomicID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeIntegerID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeFloatID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeCompositeID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeEnumID = 0;
|
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static PyTypeObject *__pyx_ptype_4h5py_3h5t_TypeCompoundID = 0;
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static struct __pyx_obj_4h5py_3h5t_TypeID *(*__pyx_f_4h5py_3h5t_typewrap)(hid_t); /*proto*/
|
|
static struct __pyx_obj_4h5py_3h5t_TypeID *(*__pyx_f_4h5py_3h5t_py_create)(PyObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_3h5t_py_create *__pyx_optional_args); /*proto*/
|
|
/* Module declarations from h5py.h5s */
|
|
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5s_SpaceID = 0;
|
|
/* Module declarations from h5py.h5p */
|
|
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropID = 0;
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropClassID = 0;
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropInstanceID = 0;
|
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static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropCreateID = 0;
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropCopyID = 0;
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|
static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropDCID = 0;
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static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropFCID = 0;
|
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static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropFAID = 0;
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5p_PropDXID = 0;
|
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static hid_t (*__pyx_f_4h5py_3h5p_pdefault)(struct __pyx_obj_4h5py_3h5p_PropID *); /*proto*/
|
|
static PyObject *(*__pyx_f_4h5py_3h5p_propwrap)(hid_t); /*proto*/
|
|
/* Module declarations from h5py._proxy */
|
|
|
|
static herr_t (*__pyx_f_4h5py_6_proxy_attr_rw)(hid_t, hid_t, void *, int); /*proto*/
|
|
static herr_t (*__pyx_f_4h5py_6_proxy_dset_rw)(hid_t, hid_t, hid_t, hid_t, hid_t, void *, int); /*proto*/
|
|
/* Module declarations from h5py.h5d */
|
|
|
|
static PyTypeObject *__pyx_ptype_4h5py_3h5d_DatasetID = 0;
|
|
#define __Pyx_MODULE_NAME "h5py.h5d"
|
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int __pyx_module_is_main_h5py__h5d = 0;
|
|
|
|
/* Implementation of h5py.h5d */
|
|
static PyObject *__pyx_builtin_TypeError;
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static char __pyx_k_1[] = "get_simple_extent_dims";
|
|
static char __pyx_k_2[] = "get_simple_extent_ndims";
|
|
static char __pyx_k_3[] = "New shape length (%d) must match dataset rank (%d)";
|
|
static char __pyx_k_4[] = " Numpy dtype object representing the dataset type ";
|
|
static char __pyx_k_5[] = " Numpy-style shape tuple representing the dataspace ";
|
|
static char __pyx_k_6[] = " Integer giving the dataset rank (0 = scalar) ";
|
|
static char __pyx_k_7[] = "\n Provides access to the low-level HDF5 \"H5D\" dataset interface.\n";
|
|
static char __pyx_k_8[] = "SPACE_STATUS_NOT_ALLOCATED";
|
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static char __pyx_k_9[] = "SPACE_STATUS_PART_ALLOCATED";
|
|
static char __pyx_k_10[] = "SPACE_STATUS_ALLOCATED";
|
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static char __pyx_k_11[] = "FILL_VALUE_UNDEFINED";
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static char __pyx_k_12[] = "FILL_VALUE_USER_DEFINED";
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static char __pyx_k__id[] = "id";
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static char __pyx_k__loc[] = "loc";
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static char __pyx_k__tid[] = "tid";
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|
static char __pyx_k__dcpl[] = "dcpl";
|
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static char __pyx_k__dxpl[] = "dxpl";
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static char __pyx_k__name[] = "name";
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static char __pyx_k__dtype[] = "dtype";
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static char __pyx_k__flags[] = "flags";
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static char __pyx_k__mtype[] = "mtype";
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static char __pyx_k__space[] = "space";
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static char __pyx_k___dtype[] = "_dtype";
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static char __pyx_k__fspace[] = "fspace";
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static char __pyx_k__mspace[] = "mspace";
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static char __pyx_k__CHUNKED[] = "CHUNKED";
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static char __pyx_k__COMPACT[] = "COMPACT";
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static char __pyx_k__arr_obj[] = "arr_obj";
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static char __pyx_k____main__[] = "__main__";
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static char __pyx_k__get_type[] = "get_type";
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|
static char __pyx_k__TypeError[] = "TypeError";
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|
static char __pyx_k__get_space[] = "get_space";
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|
static char __pyx_k__CONTIGUOUS[] = "CONTIGUOUS";
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|
static char __pyx_k__ALLOC_TIME_INCR[] = "ALLOC_TIME_INCR";
|
|
static char __pyx_k__ALLOC_TIME_LATE[] = "ALLOC_TIME_LATE";
|
|
static char __pyx_k__FILL_TIME_ALLOC[] = "FILL_TIME_ALLOC";
|
|
static char __pyx_k__FILL_TIME_IFSET[] = "FILL_TIME_IFSET";
|
|
static char __pyx_k__FILL_TIME_NEVER[] = "FILL_TIME_NEVER";
|
|
static char __pyx_k__ALLOC_TIME_EARLY[] = "ALLOC_TIME_EARLY";
|
|
static char __pyx_k__ALLOC_TIME_DEFAULT[] = "ALLOC_TIME_DEFAULT";
|
|
static char __pyx_k__FILL_VALUE_DEFAULT[] = "FILL_VALUE_DEFAULT";
|
|
static PyObject *__pyx_n_s_1;
|
|
static PyObject *__pyx_n_s_10;
|
|
static PyObject *__pyx_n_s_11;
|
|
static PyObject *__pyx_n_s_12;
|
|
static PyObject *__pyx_n_s_2;
|
|
static PyObject *__pyx_kp_s_3;
|
|
static PyObject *__pyx_n_s_8;
|
|
static PyObject *__pyx_n_s_9;
|
|
static PyObject *__pyx_n_s__ALLOC_TIME_DEFAULT;
|
|
static PyObject *__pyx_n_s__ALLOC_TIME_EARLY;
|
|
static PyObject *__pyx_n_s__ALLOC_TIME_INCR;
|
|
static PyObject *__pyx_n_s__ALLOC_TIME_LATE;
|
|
static PyObject *__pyx_n_s__CHUNKED;
|
|
static PyObject *__pyx_n_s__COMPACT;
|
|
static PyObject *__pyx_n_s__CONTIGUOUS;
|
|
static PyObject *__pyx_n_s__FILL_TIME_ALLOC;
|
|
static PyObject *__pyx_n_s__FILL_TIME_IFSET;
|
|
static PyObject *__pyx_n_s__FILL_TIME_NEVER;
|
|
static PyObject *__pyx_n_s__FILL_VALUE_DEFAULT;
|
|
static PyObject *__pyx_n_s__TypeError;
|
|
static PyObject *__pyx_n_s____main__;
|
|
static PyObject *__pyx_n_s___dtype;
|
|
static PyObject *__pyx_n_s__arr_obj;
|
|
static PyObject *__pyx_n_s__dcpl;
|
|
static PyObject *__pyx_n_s__dtype;
|
|
static PyObject *__pyx_n_s__dxpl;
|
|
static PyObject *__pyx_n_s__flags;
|
|
static PyObject *__pyx_n_s__fspace;
|
|
static PyObject *__pyx_n_s__get_space;
|
|
static PyObject *__pyx_n_s__get_type;
|
|
static PyObject *__pyx_n_s__id;
|
|
static PyObject *__pyx_n_s__loc;
|
|
static PyObject *__pyx_n_s__mspace;
|
|
static PyObject *__pyx_n_s__mtype;
|
|
static PyObject *__pyx_n_s__name;
|
|
static PyObject *__pyx_n_s__space;
|
|
static PyObject *__pyx_n_s__tid;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":83
|
|
*
|
|
* ELSE:
|
|
* def create(ObjectID loc not None, char* name, TypeID tid not None, # <<<<<<<<<<<<<<
|
|
* SpaceID space not None, PropID dcpl=None):
|
|
* """ (ObjectID loc, STRING name, TypeID tid, SpaceID space,
|
|
*/
|
|
|
|
static PyObject *__pyx_pf_4h5py_3h5d_create(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
static char __pyx_doc_4h5py_3h5d_create[] = " (ObjectID loc, STRING name, TypeID tid, SpaceID space,\n PropDCID dcpl=None ) \n => DatasetID\n\n Create a new dataset under an HDF5 file or group. Keyword dcpl\n may be a dataset creation property list.\n ";
|
|
static PyObject *__pyx_pf_4h5py_3h5d_create(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
struct __pyx_obj_4h5py_2h5_ObjectID *__pyx_v_loc = 0;
|
|
char *__pyx_v_name;
|
|
struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_tid = 0;
|
|
struct __pyx_obj_4h5py_3h5s_SpaceID *__pyx_v_space = 0;
|
|
struct __pyx_obj_4h5py_3h5p_PropID *__pyx_v_dcpl = 0;
|
|
PyObject *__pyx_r = NULL;
|
|
hid_t __pyx_t_1;
|
|
PyObject *__pyx_t_2 = NULL;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__loc,&__pyx_n_s__name,&__pyx_n_s__tid,&__pyx_n_s__space,&__pyx_n_s__dcpl,0};
|
|
__Pyx_RefNannySetupContext("create");
|
|
__pyx_self = __pyx_self;
|
|
if (unlikely(__pyx_kwds)) {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":84
|
|
* ELSE:
|
|
* def create(ObjectID loc not None, char* name, TypeID tid not None,
|
|
* SpaceID space not None, PropID dcpl=None): # <<<<<<<<<<<<<<
|
|
* """ (ObjectID loc, STRING name, TypeID tid, SpaceID space,
|
|
* PropDCID dcpl=None )
|
|
*/
|
|
Py_ssize_t kw_args = PyDict_Size(__pyx_kwds);
|
|
PyObject* values[5] = {0,0,0,0,0};
|
|
values[4] = (PyObject*)((struct __pyx_obj_4h5py_3h5p_PropID *)Py_None);
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
case 0: break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 0:
|
|
values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__loc);
|
|
if (likely(values[0])) kw_args--;
|
|
else goto __pyx_L5_argtuple_error;
|
|
case 1:
|
|
values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__name);
|
|
if (likely(values[1])) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("create", 0, 4, 5, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 2:
|
|
values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__tid);
|
|
if (likely(values[2])) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("create", 0, 4, 5, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 3:
|
|
values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__space);
|
|
if (likely(values[3])) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("create", 0, 4, 5, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 4:
|
|
if (kw_args > 0) {
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":161
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*
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* def read(self, SpaceID mspace not None, SpaceID fspace not None,
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if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_arr_obj), __pyx_ptype_4h5py_5numpy_ndarray, 0, "arr_obj", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 161; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_mtype), __pyx_ptype_4h5py_3h5t_TypeID, 1, "mtype", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 161; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_dxpl), __pyx_ptype_4h5py_3h5p_PropID, 1, "dxpl", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 162; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":184
|
|
* cdef int oldflags
|
|
*
|
|
* if mtype is None: # <<<<<<<<<<<<<<
|
|
* mtype = py_create(arr_obj.dtype)
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|
* check_numpy_write(arr_obj, -1)
|
|
*/
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__pyx_t_1 = (((PyObject *)__pyx_v_mtype) == Py_None);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":185
|
|
*
|
|
* if mtype is None:
|
|
* mtype = py_create(arr_obj.dtype) # <<<<<<<<<<<<<<
|
|
* check_numpy_write(arr_obj, -1)
|
|
*
|
|
*/
|
|
__pyx_t_2 = PyObject_GetAttr(((PyObject *)__pyx_v_arr_obj), __pyx_n_s__dtype); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 185; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_2);
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__pyx_t_3 = ((PyObject *)__pyx_f_4h5py_3h5t_py_create(__pyx_t_2, 0, NULL)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 185; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__Pyx_GOTREF(__pyx_t_3);
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__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
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__Pyx_DECREF(((PyObject *)__pyx_v_mtype));
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__pyx_v_mtype = ((struct __pyx_obj_4h5py_3h5t_TypeID *)__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
goto __pyx_L6;
|
|
}
|
|
__pyx_L6:;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":186
|
|
* if mtype is None:
|
|
* mtype = py_create(arr_obj.dtype)
|
|
* check_numpy_write(arr_obj, -1) # <<<<<<<<<<<<<<
|
|
*
|
|
* self_id = self.id
|
|
*/
|
|
__pyx_t_5.__pyx_n = 1;
|
|
__pyx_t_5.space_id = -1;
|
|
__pyx_t_4 = __pyx_f_4h5py_5utils_check_numpy_write(__pyx_v_arr_obj, 0, &__pyx_t_5); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 186; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":188
|
|
* check_numpy_write(arr_obj, -1)
|
|
*
|
|
* self_id = self.id # <<<<<<<<<<<<<<
|
|
* mtype_id = mtype.id
|
|
* mspace_id = mspace.id
|
|
*/
|
|
__pyx_v_self_id = ((struct __pyx_obj_4h5py_3h5d_DatasetID *)__pyx_v_self)->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":189
|
|
*
|
|
* self_id = self.id
|
|
* mtype_id = mtype.id # <<<<<<<<<<<<<<
|
|
* mspace_id = mspace.id
|
|
* fspace_id = fspace.id
|
|
*/
|
|
__pyx_v_mtype_id = __pyx_v_mtype->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":190
|
|
* self_id = self.id
|
|
* mtype_id = mtype.id
|
|
* mspace_id = mspace.id # <<<<<<<<<<<<<<
|
|
* fspace_id = fspace.id
|
|
* plist_id = pdefault(dxpl)
|
|
*/
|
|
__pyx_v_mspace_id = __pyx_v_mspace->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":191
|
|
* mtype_id = mtype.id
|
|
* mspace_id = mspace.id
|
|
* fspace_id = fspace.id # <<<<<<<<<<<<<<
|
|
* plist_id = pdefault(dxpl)
|
|
* data = PyArray_DATA(arr_obj)
|
|
*/
|
|
__pyx_v_fspace_id = __pyx_v_fspace->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":192
|
|
* mspace_id = mspace.id
|
|
* fspace_id = fspace.id
|
|
* plist_id = pdefault(dxpl) # <<<<<<<<<<<<<<
|
|
* data = PyArray_DATA(arr_obj)
|
|
*
|
|
*/
|
|
__pyx_v_plist_id = __pyx_f_4h5py_3h5p_pdefault(__pyx_v_dxpl);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":193
|
|
* fspace_id = fspace.id
|
|
* plist_id = pdefault(dxpl)
|
|
* data = PyArray_DATA(arr_obj) # <<<<<<<<<<<<<<
|
|
*
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach
|
|
*/
|
|
__pyx_v_data = PyArray_DATA(__pyx_v_arr_obj);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":195
|
|
* data = PyArray_DATA(arr_obj)
|
|
*
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach # <<<<<<<<<<<<<<
|
|
* try:
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 1)
|
|
*/
|
|
__pyx_v_arr_obj->flags &= (~NPY_WRITEABLE);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":196
|
|
*
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach
|
|
* try: # <<<<<<<<<<<<<<
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 1)
|
|
* finally:
|
|
*/
|
|
/*try:*/ {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":197
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach
|
|
* try:
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 1) # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* arr_obj.flags |= NPY_WRITEABLE
|
|
*/
|
|
__pyx_t_6 = __pyx_f_4h5py_6_proxy_dset_rw(__pyx_v_self_id, __pyx_v_mtype_id, __pyx_v_mspace_id, __pyx_v_fspace_id, __pyx_v_plist_id, __pyx_v_data, 1); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 197; __pyx_clineno = __LINE__; goto __pyx_L8;}
|
|
}
|
|
/*finally:*/ {
|
|
int __pyx_why;
|
|
PyObject *__pyx_exc_type, *__pyx_exc_value, *__pyx_exc_tb;
|
|
int __pyx_exc_lineno;
|
|
__pyx_exc_type = 0; __pyx_exc_value = 0; __pyx_exc_tb = 0; __pyx_exc_lineno = 0;
|
|
__pyx_why = 0; goto __pyx_L9;
|
|
__pyx_L8: {
|
|
__pyx_why = 4;
|
|
__Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
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|
__Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
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__Pyx_ErrFetch(&__pyx_exc_type, &__pyx_exc_value, &__pyx_exc_tb);
|
|
__pyx_exc_lineno = __pyx_lineno;
|
|
goto __pyx_L9;
|
|
}
|
|
__pyx_L9:;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":199
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 1)
|
|
* finally:
|
|
* arr_obj.flags |= NPY_WRITEABLE # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__pyx_v_arr_obj->flags |= NPY_WRITEABLE;
|
|
switch (__pyx_why) {
|
|
case 4: {
|
|
__Pyx_ErrRestore(__pyx_exc_type, __pyx_exc_value, __pyx_exc_tb);
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__pyx_lineno = __pyx_exc_lineno;
|
|
__pyx_exc_type = 0;
|
|
__pyx_exc_value = 0;
|
|
__pyx_exc_tb = 0;
|
|
goto __pyx_L1_error;
|
|
}
|
|
}
|
|
}
|
|
|
|
__pyx_r = Py_None; __Pyx_INCREF(Py_None);
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_2);
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_AddTraceback("h5py.h5d.DatasetID.read");
|
|
__pyx_r = NULL;
|
|
__pyx_L0:;
|
|
__Pyx_DECREF((PyObject *)__pyx_v_self);
|
|
__Pyx_DECREF((PyObject *)__pyx_v_mspace);
|
|
__Pyx_DECREF((PyObject *)__pyx_v_fspace);
|
|
__Pyx_DECREF((PyObject *)__pyx_v_arr_obj);
|
|
__Pyx_DECREF((PyObject *)__pyx_v_mtype);
|
|
__Pyx_DECREF((PyObject *)__pyx_v_dxpl);
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|
__Pyx_XGIVEREF(__pyx_r);
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__Pyx_RefNannyFinishContext();
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|
}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":202
|
|
*
|
|
*
|
|
* def write(self, SpaceID mspace not None, SpaceID fspace not None, # <<<<<<<<<<<<<<
|
|
* ndarray arr_obj not None, TypeID mtype=None,
|
|
* PropID dxpl=None):
|
|
*/
|
|
|
|
static PyObject *__pyx_pf_4h5py_3h5d_9DatasetID_write(PyObject *__pyx_v_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
static char __pyx_doc_4h5py_3h5d_9DatasetID_write[] = " (SpaceID mspace, SpaceID fspace, NDARRAY arr_obj, \n TypeID mtype=None, PropDXID dxpl=None)\n\n Write data from a Numpy array to an HDF5 dataset. Keyword dxpl may \n be a dataset transfer property list.\n\n The provided Numpy array must be C-contiguous. If this is not the\n case, ValueError will be raised and the read will fail.\n ";
|
|
static PyObject *__pyx_pf_4h5py_3h5d_9DatasetID_write(PyObject *__pyx_v_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
struct __pyx_obj_4h5py_3h5s_SpaceID *__pyx_v_mspace = 0;
|
|
struct __pyx_obj_4h5py_3h5s_SpaceID *__pyx_v_fspace = 0;
|
|
PyArrayObject *__pyx_v_arr_obj = 0;
|
|
struct __pyx_obj_4h5py_3h5t_TypeID *__pyx_v_mtype = 0;
|
|
struct __pyx_obj_4h5py_3h5p_PropID *__pyx_v_dxpl = 0;
|
|
hid_t __pyx_v_self_id;
|
|
hid_t __pyx_v_mtype_id;
|
|
hid_t __pyx_v_mspace_id;
|
|
hid_t __pyx_v_fspace_id;
|
|
hid_t __pyx_v_plist_id;
|
|
void *__pyx_v_data;
|
|
PyObject *__pyx_r = NULL;
|
|
int __pyx_t_1;
|
|
PyObject *__pyx_t_2 = NULL;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
int __pyx_t_4;
|
|
struct __pyx_opt_args_4h5py_5utils_check_numpy_read __pyx_t_5;
|
|
herr_t __pyx_t_6;
|
|
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__mspace,&__pyx_n_s__fspace,&__pyx_n_s__arr_obj,&__pyx_n_s__mtype,&__pyx_n_s__dxpl,0};
|
|
__Pyx_RefNannySetupContext("write");
|
|
if (unlikely(__pyx_kwds)) {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":204
|
|
* def write(self, SpaceID mspace not None, SpaceID fspace not None,
|
|
* ndarray arr_obj not None, TypeID mtype=None,
|
|
* PropID dxpl=None): # <<<<<<<<<<<<<<
|
|
* """ (SpaceID mspace, SpaceID fspace, NDARRAY arr_obj,
|
|
* TypeID mtype=None, PropDXID dxpl=None)
|
|
*/
|
|
Py_ssize_t kw_args = PyDict_Size(__pyx_kwds);
|
|
PyObject* values[5] = {0,0,0,0,0};
|
|
values[3] = (PyObject*)((struct __pyx_obj_4h5py_3h5t_TypeID *)Py_None);
|
|
values[4] = (PyObject*)((struct __pyx_obj_4h5py_3h5p_PropID *)Py_None);
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
case 0: break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 0:
|
|
values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__mspace);
|
|
if (likely(values[0])) kw_args--;
|
|
else goto __pyx_L5_argtuple_error;
|
|
case 1:
|
|
values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__fspace);
|
|
if (likely(values[1])) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("write", 0, 3, 5, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 2:
|
|
values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__arr_obj);
|
|
if (likely(values[2])) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("write", 0, 3, 5, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 3:
|
|
if (kw_args > 1) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s__mtype);
|
|
if (unlikely(value)) { values[3] = value; kw_args--; }
|
|
}
|
|
case 4:
|
|
if (kw_args > 1) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s__dxpl);
|
|
if (unlikely(value)) { values[4] = value; kw_args--; }
|
|
}
|
|
}
|
|
if (unlikely(kw_args > 0)) {
|
|
if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "write") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
__pyx_v_mspace = ((struct __pyx_obj_4h5py_3h5s_SpaceID *)values[0]);
|
|
__pyx_v_fspace = ((struct __pyx_obj_4h5py_3h5s_SpaceID *)values[1]);
|
|
__pyx_v_arr_obj = ((PyArrayObject *)values[2]);
|
|
__pyx_v_mtype = ((struct __pyx_obj_4h5py_3h5t_TypeID *)values[3]);
|
|
__pyx_v_dxpl = ((struct __pyx_obj_4h5py_3h5p_PropID *)values[4]);
|
|
} else {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":203
|
|
*
|
|
* def write(self, SpaceID mspace not None, SpaceID fspace not None,
|
|
* ndarray arr_obj not None, TypeID mtype=None, # <<<<<<<<<<<<<<
|
|
* PropID dxpl=None):
|
|
* """ (SpaceID mspace, SpaceID fspace, NDARRAY arr_obj,
|
|
*/
|
|
__pyx_v_mtype = ((struct __pyx_obj_4h5py_3h5t_TypeID *)Py_None);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":204
|
|
* def write(self, SpaceID mspace not None, SpaceID fspace not None,
|
|
* ndarray arr_obj not None, TypeID mtype=None,
|
|
* PropID dxpl=None): # <<<<<<<<<<<<<<
|
|
* """ (SpaceID mspace, SpaceID fspace, NDARRAY arr_obj,
|
|
* TypeID mtype=None, PropDXID dxpl=None)
|
|
*/
|
|
__pyx_v_dxpl = ((struct __pyx_obj_4h5py_3h5p_PropID *)Py_None);
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 5:
|
|
__pyx_v_dxpl = ((struct __pyx_obj_4h5py_3h5p_PropID *)PyTuple_GET_ITEM(__pyx_args, 4));
|
|
case 4:
|
|
__pyx_v_mtype = ((struct __pyx_obj_4h5py_3h5t_TypeID *)PyTuple_GET_ITEM(__pyx_args, 3));
|
|
case 3:
|
|
__pyx_v_arr_obj = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 2));
|
|
__pyx_v_fspace = ((struct __pyx_obj_4h5py_3h5s_SpaceID *)PyTuple_GET_ITEM(__pyx_args, 1));
|
|
__pyx_v_mspace = ((struct __pyx_obj_4h5py_3h5s_SpaceID *)PyTuple_GET_ITEM(__pyx_args, 0));
|
|
break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
}
|
|
goto __pyx_L4_argument_unpacking_done;
|
|
__pyx_L5_argtuple_error:;
|
|
__Pyx_RaiseArgtupleInvalid("write", 0, 3, 5, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
__pyx_L3_error:;
|
|
__Pyx_AddTraceback("h5py.h5d.DatasetID.write");
|
|
return NULL;
|
|
__pyx_L4_argument_unpacking_done:;
|
|
__Pyx_INCREF((PyObject *)__pyx_v_self);
|
|
__Pyx_INCREF((PyObject *)__pyx_v_mspace);
|
|
__Pyx_INCREF((PyObject *)__pyx_v_fspace);
|
|
__Pyx_INCREF((PyObject *)__pyx_v_arr_obj);
|
|
__Pyx_INCREF((PyObject *)__pyx_v_mtype);
|
|
__Pyx_INCREF((PyObject *)__pyx_v_dxpl);
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_mspace), __pyx_ptype_4h5py_3h5s_SpaceID, 0, "mspace", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_fspace), __pyx_ptype_4h5py_3h5s_SpaceID, 0, "fspace", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_arr_obj), __pyx_ptype_4h5py_5numpy_ndarray, 0, "arr_obj", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 203; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_mtype), __pyx_ptype_4h5py_3h5t_TypeID, 1, "mtype", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 203; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_dxpl), __pyx_ptype_4h5py_3h5p_PropID, 1, "dxpl", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 204; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":218
|
|
* cdef int oldflags
|
|
*
|
|
* if mtype is None: # <<<<<<<<<<<<<<
|
|
* mtype = py_create(arr_obj.dtype)
|
|
* check_numpy_read(arr_obj, -1)
|
|
*/
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|
__pyx_t_1 = (((PyObject *)__pyx_v_mtype) == Py_None);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":219
|
|
*
|
|
* if mtype is None:
|
|
* mtype = py_create(arr_obj.dtype) # <<<<<<<<<<<<<<
|
|
* check_numpy_read(arr_obj, -1)
|
|
*
|
|
*/
|
|
__pyx_t_2 = PyObject_GetAttr(((PyObject *)__pyx_v_arr_obj), __pyx_n_s__dtype); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 219; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_2);
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__pyx_t_3 = ((PyObject *)__pyx_f_4h5py_3h5t_py_create(__pyx_t_2, 0, NULL)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 219; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
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__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
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__Pyx_DECREF(((PyObject *)__pyx_v_mtype));
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__pyx_v_mtype = ((struct __pyx_obj_4h5py_3h5t_TypeID *)__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
goto __pyx_L6;
|
|
}
|
|
__pyx_L6:;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":220
|
|
* if mtype is None:
|
|
* mtype = py_create(arr_obj.dtype)
|
|
* check_numpy_read(arr_obj, -1) # <<<<<<<<<<<<<<
|
|
*
|
|
* self_id = self.id
|
|
*/
|
|
__pyx_t_5.__pyx_n = 1;
|
|
__pyx_t_5.space_id = -1;
|
|
__pyx_t_4 = __pyx_f_4h5py_5utils_check_numpy_read(__pyx_v_arr_obj, 0, &__pyx_t_5); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 220; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":222
|
|
* check_numpy_read(arr_obj, -1)
|
|
*
|
|
* self_id = self.id # <<<<<<<<<<<<<<
|
|
* mtype_id = mtype.id
|
|
* mspace_id = mspace.id
|
|
*/
|
|
__pyx_v_self_id = ((struct __pyx_obj_4h5py_3h5d_DatasetID *)__pyx_v_self)->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":223
|
|
*
|
|
* self_id = self.id
|
|
* mtype_id = mtype.id # <<<<<<<<<<<<<<
|
|
* mspace_id = mspace.id
|
|
* fspace_id = fspace.id
|
|
*/
|
|
__pyx_v_mtype_id = __pyx_v_mtype->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":224
|
|
* self_id = self.id
|
|
* mtype_id = mtype.id
|
|
* mspace_id = mspace.id # <<<<<<<<<<<<<<
|
|
* fspace_id = fspace.id
|
|
* plist_id = pdefault(dxpl)
|
|
*/
|
|
__pyx_v_mspace_id = __pyx_v_mspace->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":225
|
|
* mtype_id = mtype.id
|
|
* mspace_id = mspace.id
|
|
* fspace_id = fspace.id # <<<<<<<<<<<<<<
|
|
* plist_id = pdefault(dxpl)
|
|
* data = PyArray_DATA(arr_obj)
|
|
*/
|
|
__pyx_v_fspace_id = __pyx_v_fspace->__pyx_base.id;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":226
|
|
* mspace_id = mspace.id
|
|
* fspace_id = fspace.id
|
|
* plist_id = pdefault(dxpl) # <<<<<<<<<<<<<<
|
|
* data = PyArray_DATA(arr_obj)
|
|
*
|
|
*/
|
|
__pyx_v_plist_id = __pyx_f_4h5py_3h5p_pdefault(__pyx_v_dxpl);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":227
|
|
* fspace_id = fspace.id
|
|
* plist_id = pdefault(dxpl)
|
|
* data = PyArray_DATA(arr_obj) # <<<<<<<<<<<<<<
|
|
*
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach
|
|
*/
|
|
__pyx_v_data = PyArray_DATA(__pyx_v_arr_obj);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":229
|
|
* data = PyArray_DATA(arr_obj)
|
|
*
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach # <<<<<<<<<<<<<<
|
|
* try:
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 0)
|
|
*/
|
|
__pyx_v_arr_obj->flags &= (~NPY_WRITEABLE);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":230
|
|
*
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach
|
|
* try: # <<<<<<<<<<<<<<
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 0)
|
|
* finally:
|
|
*/
|
|
/*try:*/ {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":231
|
|
* arr_obj.flags &= (~NPY_WRITEABLE) # Wish-it-was-a-mutex approach
|
|
* try:
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 0) # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* arr_obj.flags |= NPY_WRITEABLE
|
|
*/
|
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__pyx_t_6 = __pyx_f_4h5py_6_proxy_dset_rw(__pyx_v_self_id, __pyx_v_mtype_id, __pyx_v_mspace_id, __pyx_v_fspace_id, __pyx_v_plist_id, __pyx_v_data, 0); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L8;}
|
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}
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/*finally:*/ {
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int __pyx_why;
|
|
PyObject *__pyx_exc_type, *__pyx_exc_value, *__pyx_exc_tb;
|
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int __pyx_exc_lineno;
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__pyx_exc_type = 0; __pyx_exc_value = 0; __pyx_exc_tb = 0; __pyx_exc_lineno = 0;
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__pyx_why = 0; goto __pyx_L9;
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__pyx_L8: {
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__pyx_why = 4;
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__Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
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__Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
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goto __pyx_L9;
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}
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__pyx_L9:;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":233
|
|
* dset_rw(self_id, mtype_id, mspace_id, fspace_id, plist_id, data, 0)
|
|
* finally:
|
|
* arr_obj.flags |= NPY_WRITEABLE # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
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__pyx_v_arr_obj->flags |= NPY_WRITEABLE;
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switch (__pyx_why) {
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case 4: {
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__Pyx_ErrRestore(__pyx_exc_type, __pyx_exc_value, __pyx_exc_tb);
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__pyx_exc_type = 0;
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__pyx_exc_value = 0;
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__pyx_exc_tb = 0;
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goto __pyx_L1_error;
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}
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}
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}
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__pyx_r = Py_None; __Pyx_INCREF(Py_None);
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goto __pyx_L0;
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__Pyx_XDECREF(__pyx_t_3);
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__Pyx_AddTraceback("h5py.h5d.DatasetID.write");
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__pyx_r = NULL;
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__pyx_L0:;
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__Pyx_DECREF((PyObject *)__pyx_v_self);
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__Pyx_DECREF((PyObject *)__pyx_v_mspace);
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__Pyx_DECREF((PyObject *)__pyx_v_fspace);
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__Pyx_DECREF((PyObject *)__pyx_v_arr_obj);
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__Pyx_DECREF((PyObject *)__pyx_v_mtype);
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__Pyx_DECREF((PyObject *)__pyx_v_dxpl);
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__Pyx_XGIVEREF(__pyx_r);
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":236
|
|
*
|
|
*
|
|
* def extend(self, tuple shape): # <<<<<<<<<<<<<<
|
|
* """ (TUPLE shape)
|
|
*
|
|
*/
|
|
|
|
static PyObject *__pyx_pf_4h5py_3h5d_9DatasetID_extend(PyObject *__pyx_v_self, PyObject *__pyx_v_shape); /*proto*/
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|
static char __pyx_doc_4h5py_3h5d_9DatasetID_extend[] = " (TUPLE shape)\n\n Extend the given dataset so it's at least as big as \"shape\". Note \n that a dataset may only be extended up to the maximum dimensions of \n its dataspace, which are fixed when the dataset is created.\n ";
|
|
static PyObject *__pyx_pf_4h5py_3h5d_9DatasetID_extend(PyObject *__pyx_v_self, PyObject *__pyx_v_shape) {
|
|
int __pyx_v_rank;
|
|
hid_t __pyx_v_space_id;
|
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hsize_t *__pyx_v_dims;
|
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PyObject *__pyx_r = NULL;
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hid_t __pyx_t_1;
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int __pyx_t_2;
|
|
Py_ssize_t __pyx_t_3;
|
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int __pyx_t_4;
|
|
PyObject *__pyx_t_5 = NULL;
|
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PyObject *__pyx_t_6 = NULL;
|
|
PyObject *__pyx_t_7 = NULL;
|
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void *__pyx_t_8;
|
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herr_t __pyx_t_9;
|
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__Pyx_RefNannySetupContext("extend");
|
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__Pyx_INCREF((PyObject *)__pyx_v_self);
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__Pyx_INCREF(__pyx_v_shape);
|
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if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_shape), &PyTuple_Type, 1, "shape", 1))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":244
|
|
* """
|
|
* cdef int rank
|
|
* cdef hid_t space_id = 0 # <<<<<<<<<<<<<<
|
|
* cdef hsize_t* dims = NULL
|
|
*
|
|
*/
|
|
__pyx_v_space_id = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":245
|
|
* cdef int rank
|
|
* cdef hid_t space_id = 0
|
|
* cdef hsize_t* dims = NULL # <<<<<<<<<<<<<<
|
|
*
|
|
* try:
|
|
*/
|
|
__pyx_v_dims = NULL;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":247
|
|
* cdef hsize_t* dims = NULL
|
|
*
|
|
* try: # <<<<<<<<<<<<<<
|
|
* space_id = H5Dget_space(self.id)
|
|
* rank = H5Sget_simple_extent_ndims(space_id)
|
|
*/
|
|
/*try:*/ {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":248
|
|
*
|
|
* try:
|
|
* space_id = H5Dget_space(self.id) # <<<<<<<<<<<<<<
|
|
* rank = H5Sget_simple_extent_ndims(space_id)
|
|
*
|
|
*/
|
|
__pyx_t_1 = H5Dget_space(((struct __pyx_obj_4h5py_3h5d_DatasetID *)__pyx_v_self)->__pyx_base.id); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
__pyx_v_space_id = __pyx_t_1;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":249
|
|
* try:
|
|
* space_id = H5Dget_space(self.id)
|
|
* rank = H5Sget_simple_extent_ndims(space_id) # <<<<<<<<<<<<<<
|
|
*
|
|
* if len(shape) != rank:
|
|
*/
|
|
__pyx_t_2 = H5Sget_simple_extent_ndims(__pyx_v_space_id); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
__pyx_v_rank = __pyx_t_2;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":251
|
|
* rank = H5Sget_simple_extent_ndims(space_id)
|
|
*
|
|
* if len(shape) != rank: # <<<<<<<<<<<<<<
|
|
* raise TypeError("New shape length (%d) must match dataset rank (%d)" % (len(shape), rank))
|
|
*
|
|
*/
|
|
__pyx_t_3 = PyObject_Length(((PyObject *)__pyx_v_shape)); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 251; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
__pyx_t_4 = (__pyx_t_3 != __pyx_v_rank);
|
|
if (__pyx_t_4) {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":252
|
|
*
|
|
* if len(shape) != rank:
|
|
* raise TypeError("New shape length (%d) must match dataset rank (%d)" % (len(shape), rank)) # <<<<<<<<<<<<<<
|
|
*
|
|
* dims = <hsize_t*>emalloc(sizeof(hsize_t)*rank)
|
|
*/
|
|
__pyx_t_3 = PyObject_Length(((PyObject *)__pyx_v_shape)); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
__pyx_t_5 = PyInt_FromSsize_t(__pyx_t_3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
__Pyx_GOTREF(__pyx_t_5);
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__pyx_t_6 = PyInt_FromLong(__pyx_v_rank); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
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__Pyx_GOTREF(__pyx_t_6);
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__pyx_t_7 = PyTuple_New(2); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
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__Pyx_GOTREF(__pyx_t_7);
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PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_t_5);
|
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__Pyx_GIVEREF(__pyx_t_5);
|
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PyTuple_SET_ITEM(__pyx_t_7, 1, __pyx_t_6);
|
|
__Pyx_GIVEREF(__pyx_t_6);
|
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__pyx_t_5 = 0;
|
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__pyx_t_6 = 0;
|
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__pyx_t_6 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_3), __pyx_t_7); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
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__Pyx_GOTREF(__pyx_t_6);
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
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__pyx_t_7 = PyTuple_New(1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
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__Pyx_GOTREF(__pyx_t_7);
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PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_t_6);
|
|
__Pyx_GIVEREF(__pyx_t_6);
|
|
__pyx_t_6 = 0;
|
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__pyx_t_6 = PyObject_Call(__pyx_builtin_TypeError, __pyx_t_7, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
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__Pyx_GOTREF(__pyx_t_6);
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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__Pyx_Raise(__pyx_t_6, 0, 0);
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__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
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{__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
goto __pyx_L8;
|
|
}
|
|
__pyx_L8:;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":254
|
|
* raise TypeError("New shape length (%d) must match dataset rank (%d)" % (len(shape), rank))
|
|
*
|
|
* dims = <hsize_t*>emalloc(sizeof(hsize_t)*rank) # <<<<<<<<<<<<<<
|
|
* convert_tuple(shape, dims, rank)
|
|
* H5Dextend(self.id, dims)
|
|
*/
|
|
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|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":255
|
|
*
|
|
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|
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*/
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|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":256
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|
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|
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|
|
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|
|
*
|
|
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|
|
*/
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|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":259
|
|
*
|
|
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|
|
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__pyx_f_4h5py_5utils_efree(__pyx_v_dims);
|
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|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":260
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|
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*
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|
*
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static PyObject *__pyx_pf_4h5py_3h5d_9DatasetID_set_extent(PyObject *__pyx_v_self, PyObject *__pyx_v_shape); /*proto*/
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static PyObject *__pyx_pf_4h5py_3h5d_9DatasetID_set_extent(PyObject *__pyx_v_self, PyObject *__pyx_v_shape) {
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|
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|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":272
|
|
* """
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|
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|
* cdef hid_t space_id = 0 # <<<<<<<<<<<<<<
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*/
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__pyx_v_space_id = 0;
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":273
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* cdef int rank
|
|
* cdef hid_t space_id = 0
|
|
* cdef hsize_t* dims = NULL # <<<<<<<<<<<<<<
|
|
*
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* try:
|
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*/
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|
__pyx_v_dims = NULL;
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|
|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":275
|
|
* cdef hsize_t* dims = NULL
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*
|
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* try: # <<<<<<<<<<<<<<
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* space_id = H5Dget_space(self.id)
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|
* rank = H5Sget_simple_extent_ndims(space_id)
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*/
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/*try:*/ {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":276
|
|
*
|
|
* try:
|
|
* space_id = H5Dget_space(self.id) # <<<<<<<<<<<<<<
|
|
* rank = H5Sget_simple_extent_ndims(space_id)
|
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*
|
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*/
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__pyx_t_1 = H5Dget_space(((struct __pyx_obj_4h5py_3h5d_DatasetID *)__pyx_v_self)->__pyx_base.id); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L6;}
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":277
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* try:
|
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* space_id = H5Dget_space(self.id)
|
|
* rank = H5Sget_simple_extent_ndims(space_id) # <<<<<<<<<<<<<<
|
|
*
|
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|
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*/
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__pyx_t_2 = H5Sget_simple_extent_ndims(__pyx_v_space_id); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 277; __pyx_clineno = __LINE__; goto __pyx_L6;}
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__pyx_v_rank = __pyx_t_2;
|
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|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":279
|
|
* rank = H5Sget_simple_extent_ndims(space_id)
|
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*
|
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|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":280
|
|
*
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* if len(shape) != rank:
|
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* raise TypeError("New shape length (%d) must match dataset rank (%d)" % (len(shape), rank)) # <<<<<<<<<<<<<<
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|
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goto __pyx_L8;
|
|
}
|
|
__pyx_L8:;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":282
|
|
* raise TypeError("New shape length (%d) must match dataset rank (%d)" % (len(shape), rank))
|
|
*
|
|
* dims = <hsize_t*>emalloc(sizeof(hsize_t)*rank) # <<<<<<<<<<<<<<
|
|
* convert_tuple(shape, dims, rank)
|
|
* H5Dset_extent(self.id, dims)
|
|
*/
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|
__pyx_t_8 = __pyx_f_4h5py_5utils_emalloc(((sizeof(hsize_t)) * __pyx_v_rank)); if (unlikely(__pyx_t_8 == NULL && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 282; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
__pyx_v_dims = ((hsize_t *)__pyx_t_8);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":283
|
|
*
|
|
* dims = <hsize_t*>emalloc(sizeof(hsize_t)*rank)
|
|
* convert_tuple(shape, dims, rank) # <<<<<<<<<<<<<<
|
|
* H5Dset_extent(self.id, dims)
|
|
*
|
|
*/
|
|
__pyx_t_2 = __pyx_f_4h5py_5utils_convert_tuple(((PyObject *)__pyx_v_shape), __pyx_v_dims, __pyx_v_rank); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L6;}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":284
|
|
* dims = <hsize_t*>emalloc(sizeof(hsize_t)*rank)
|
|
* convert_tuple(shape, dims, rank)
|
|
* H5Dset_extent(self.id, dims) # <<<<<<<<<<<<<<
|
|
*
|
|
* finally:
|
|
*/
|
|
H5Dset_extent(((struct __pyx_obj_4h5py_3h5d_DatasetID *)__pyx_v_self)->__pyx_base.id, __pyx_v_dims);
|
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/*finally:*/ {
|
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int __pyx_why;
|
|
PyObject *__pyx_exc_type, *__pyx_exc_value, *__pyx_exc_tb;
|
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int __pyx_exc_lineno;
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|
__pyx_L6: {
|
|
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|
|
__Pyx_XDECREF(__pyx_t_5); __pyx_t_5 = 0;
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|
|
__pyx_exc_lineno = __pyx_lineno;
|
|
goto __pyx_L7;
|
|
}
|
|
__pyx_L7:;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":287
|
|
*
|
|
* finally:
|
|
* efree(dims) # <<<<<<<<<<<<<<
|
|
* if space_id:
|
|
* H5Sclose(space_id)
|
|
*/
|
|
__pyx_f_4h5py_5utils_efree(__pyx_v_dims);
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":288
|
|
* finally:
|
|
* efree(dims)
|
|
* if space_id: # <<<<<<<<<<<<<<
|
|
* H5Sclose(space_id)
|
|
*
|
|
*/
|
|
__pyx_t_1 = __pyx_v_space_id;
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":289
|
|
* efree(dims)
|
|
* if space_id:
|
|
* H5Sclose(space_id) # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
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__pyx_t_9 = H5Sclose(__pyx_v_space_id); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 289; __pyx_clineno = __LINE__; goto __pyx_L9_error;}
|
|
goto __pyx_L10;
|
|
}
|
|
__pyx_L10:;
|
|
goto __pyx_L11;
|
|
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|
|
if (__pyx_why == 4) {
|
|
Py_XDECREF(__pyx_exc_type);
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|
Py_XDECREF(__pyx_exc_value);
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|
Py_XDECREF(__pyx_exc_tb);
|
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}
|
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goto __pyx_L1_error;
|
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__pyx_L11:;
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switch (__pyx_why) {
|
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case 4: {
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__Pyx_ErrRestore(__pyx_exc_type, __pyx_exc_value, __pyx_exc_tb);
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__pyx_lineno = __pyx_exc_lineno;
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__pyx_exc_value = 0;
|
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__pyx_exc_tb = 0;
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goto __pyx_L1_error;
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}
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__pyx_r = Py_None; __Pyx_INCREF(Py_None);
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goto __pyx_L0;
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|
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__Pyx_XDECREF(__pyx_t_6);
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__Pyx_XDECREF(__pyx_t_7);
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__pyx_ptype_4h5py_2h5_ObjectID->tp_dealloc(o);
|
|
}
|
|
|
|
static int __pyx_tp_traverse_4h5py_3h5d_DatasetID(PyObject *o, visitproc v, void *a) {
|
|
int e;
|
|
struct __pyx_obj_4h5py_3h5d_DatasetID *p = (struct __pyx_obj_4h5py_3h5d_DatasetID *)o;
|
|
if (__pyx_ptype_4h5py_2h5_ObjectID->tp_traverse) {
|
|
e = __pyx_ptype_4h5py_2h5_ObjectID->tp_traverse(o, v, a); if (e) return e;
|
|
}
|
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if (p->_dtype) {
|
|
e = (*v)(p->_dtype, a); if (e) return e;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static int __pyx_tp_clear_4h5py_3h5d_DatasetID(PyObject *o) {
|
|
struct __pyx_obj_4h5py_3h5d_DatasetID *p = (struct __pyx_obj_4h5py_3h5d_DatasetID *)o;
|
|
PyObject* tmp;
|
|
if (__pyx_ptype_4h5py_2h5_ObjectID->tp_clear) {
|
|
__pyx_ptype_4h5py_2h5_ObjectID->tp_clear(o);
|
|
}
|
|
tmp = ((PyObject*)p->_dtype);
|
|
p->_dtype = Py_None; Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
return 0;
|
|
}
|
|
|
|
static PyObject *__pyx_getprop_4h5py_3h5d_9DatasetID_dtype(PyObject *o, void *x) {
|
|
return __pyx_pf_4h5py_3h5d_9DatasetID_5dtype___get__(o);
|
|
}
|
|
|
|
static PyObject *__pyx_getprop_4h5py_3h5d_9DatasetID_shape(PyObject *o, void *x) {
|
|
return __pyx_pf_4h5py_3h5d_9DatasetID_5shape___get__(o);
|
|
}
|
|
|
|
static PyObject *__pyx_getprop_4h5py_3h5d_9DatasetID_rank(PyObject *o, void *x) {
|
|
return __pyx_pf_4h5py_3h5d_9DatasetID_4rank___get__(o);
|
|
}
|
|
|
|
static struct PyMethodDef __pyx_methods_4h5py_3h5d_DatasetID[] = {
|
|
{__Pyx_NAMESTR("_close"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID__close, METH_NOARGS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID__close)},
|
|
{__Pyx_NAMESTR("read"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_read, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_read)},
|
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{__Pyx_NAMESTR("write"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_write, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_write)},
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{__Pyx_NAMESTR("extend"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_extend, METH_O, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_extend)},
|
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{__Pyx_NAMESTR("set_extent"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_set_extent, METH_O, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_set_extent)},
|
|
{__Pyx_NAMESTR("get_space"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_get_space, METH_NOARGS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_get_space)},
|
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{__Pyx_NAMESTR("get_space_status"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_get_space_status, METH_NOARGS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_get_space_status)},
|
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{__Pyx_NAMESTR("get_type"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_get_type, METH_NOARGS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_get_type)},
|
|
{__Pyx_NAMESTR("get_create_plist"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_get_create_plist, METH_NOARGS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_get_create_plist)},
|
|
{__Pyx_NAMESTR("get_offset"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_get_offset, METH_NOARGS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_get_offset)},
|
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{__Pyx_NAMESTR("get_storage_size"), (PyCFunction)__pyx_pf_4h5py_3h5d_9DatasetID_get_storage_size, METH_NOARGS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_9DatasetID_get_storage_size)},
|
|
{0, 0, 0, 0}
|
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};
|
|
|
|
static struct PyGetSetDef __pyx_getsets_4h5py_3h5d_DatasetID[] = {
|
|
{(char *)"dtype", __pyx_getprop_4h5py_3h5d_9DatasetID_dtype, 0, __Pyx_DOCSTR(__pyx_k_4), 0},
|
|
{(char *)"shape", __pyx_getprop_4h5py_3h5d_9DatasetID_shape, 0, __Pyx_DOCSTR(__pyx_k_5), 0},
|
|
{(char *)"rank", __pyx_getprop_4h5py_3h5d_9DatasetID_rank, 0, __Pyx_DOCSTR(__pyx_k_6), 0},
|
|
{0, 0, 0, 0, 0}
|
|
};
|
|
|
|
static PyNumberMethods __pyx_tp_as_number_DatasetID = {
|
|
0, /*nb_add*/
|
|
0, /*nb_subtract*/
|
|
0, /*nb_multiply*/
|
|
#if PY_MAJOR_VERSION < 3
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0, /*nb_divide*/
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#endif
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0, /*nb_remainder*/
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0, /*nb_divmod*/
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0, /*nb_power*/
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0, /*nb_negative*/
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0, /*nb_positive*/
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0, /*nb_absolute*/
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0, /*nb_nonzero*/
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0, /*nb_invert*/
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0, /*nb_lshift*/
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0, /*nb_rshift*/
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0, /*nb_and*/
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0, /*nb_xor*/
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0, /*nb_or*/
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#if PY_MAJOR_VERSION < 3
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0, /*nb_coerce*/
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0, /*nb_int*/
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0, /*reserved*/
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0, /*nb_long*/
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0, /*nb_float*/
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0, /*nb_oct*/
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0, /*nb_hex*/
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0, /*nb_inplace_add*/
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0, /*nb_inplace_subtract*/
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0, /*nb_inplace_multiply*/
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#if PY_MAJOR_VERSION < 3
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0, /*nb_inplace_divide*/
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0, /*nb_inplace_remainder*/
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0, /*nb_inplace_power*/
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0, /*nb_inplace_lshift*/
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0, /*nb_inplace_rshift*/
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0, /*nb_inplace_and*/
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0, /*nb_inplace_xor*/
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0, /*nb_inplace_or*/
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0, /*nb_floor_divide*/
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0, /*nb_true_divide*/
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0, /*nb_inplace_floor_divide*/
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0, /*nb_inplace_true_divide*/
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#if (PY_MAJOR_VERSION >= 3) || (Py_TPFLAGS_DEFAULT & Py_TPFLAGS_HAVE_INDEX)
|
|
0, /*nb_index*/
|
|
#endif
|
|
};
|
|
|
|
static PySequenceMethods __pyx_tp_as_sequence_DatasetID = {
|
|
0, /*sq_length*/
|
|
0, /*sq_concat*/
|
|
0, /*sq_repeat*/
|
|
0, /*sq_item*/
|
|
0, /*sq_slice*/
|
|
0, /*sq_ass_item*/
|
|
0, /*sq_ass_slice*/
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|
0, /*sq_contains*/
|
|
0, /*sq_inplace_concat*/
|
|
0, /*sq_inplace_repeat*/
|
|
};
|
|
|
|
static PyMappingMethods __pyx_tp_as_mapping_DatasetID = {
|
|
0, /*mp_length*/
|
|
0, /*mp_subscript*/
|
|
0, /*mp_ass_subscript*/
|
|
};
|
|
|
|
static PyBufferProcs __pyx_tp_as_buffer_DatasetID = {
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*bf_getreadbuffer*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*bf_getwritebuffer*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*bf_getsegcount*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*bf_getcharbuffer*/
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|
#endif
|
|
#if PY_VERSION_HEX >= 0x02060000
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|
0, /*bf_getbuffer*/
|
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#endif
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|
#if PY_VERSION_HEX >= 0x02060000
|
|
0, /*bf_releasebuffer*/
|
|
#endif
|
|
};
|
|
|
|
PyTypeObject __pyx_type_4h5py_3h5d_DatasetID = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
__Pyx_NAMESTR("h5py.h5d.DatasetID"), /*tp_name*/
|
|
sizeof(struct __pyx_obj_4h5py_3h5d_DatasetID), /*tp_basicsize*/
|
|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_4h5py_3h5d_DatasetID, /*tp_dealloc*/
|
|
0, /*tp_print*/
|
|
0, /*tp_getattr*/
|
|
0, /*tp_setattr*/
|
|
0, /*tp_compare*/
|
|
0, /*tp_repr*/
|
|
&__pyx_tp_as_number_DatasetID, /*tp_as_number*/
|
|
&__pyx_tp_as_sequence_DatasetID, /*tp_as_sequence*/
|
|
&__pyx_tp_as_mapping_DatasetID, /*tp_as_mapping*/
|
|
0, /*tp_hash*/
|
|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
|
0, /*tp_getattro*/
|
|
0, /*tp_setattro*/
|
|
&__pyx_tp_as_buffer_DatasetID, /*tp_as_buffer*/
|
|
Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
|
|
__Pyx_DOCSTR("\n Represents an HDF5 dataset identifier.\n\n Objects of this class may be used in any HDF5 function which expects\n a dataset identifier. Also, all H5D* functions which take a dataset\n instance as their first argument are presented as methods of this\n class.\n\n Properties:\n dtype: Numpy dtype representing the dataset type\n shape: Numpy-style shape tuple representing the dataspace\n rank: Integer giving dataset rank\n\n * Hashable: Yes, unless anonymous\n * Equality: True HDF5 identity if unless anonymous\n "), /*tp_doc*/
|
|
__pyx_tp_traverse_4h5py_3h5d_DatasetID, /*tp_traverse*/
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__pyx_tp_clear_4h5py_3h5d_DatasetID, /*tp_clear*/
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|
0, /*tp_richcompare*/
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0, /*tp_weaklistoffset*/
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0, /*tp_iter*/
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0, /*tp_iternext*/
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__pyx_methods_4h5py_3h5d_DatasetID, /*tp_methods*/
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|
0, /*tp_members*/
|
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__pyx_getsets_4h5py_3h5d_DatasetID, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
|
|
0, /*tp_descr_get*/
|
|
0, /*tp_descr_set*/
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0, /*tp_dictoffset*/
|
|
0, /*tp_init*/
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0, /*tp_alloc*/
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__pyx_tp_new_4h5py_3h5d_DatasetID, /*tp_new*/
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|
0, /*tp_free*/
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0, /*tp_is_gc*/
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0, /*tp_bases*/
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0, /*tp_mro*/
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0, /*tp_cache*/
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0, /*tp_subclasses*/
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0, /*tp_weaklist*/
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0, /*tp_del*/
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#if PY_VERSION_HEX >= 0x02060000
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0, /*tp_version_tag*/
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static struct PyMethodDef __pyx_methods[] = {
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{__Pyx_NAMESTR("create"), (PyCFunction)__pyx_pf_4h5py_3h5d_create, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_create)},
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{__Pyx_NAMESTR("open"), (PyCFunction)__pyx_pf_4h5py_3h5d_open, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_4h5py_3h5d_open)},
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{0, 0, 0, 0}
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PyModuleDef_HEAD_INIT,
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return 0;
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PyMODINIT_FUNC inith5d(void); /*proto*/
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PyMODINIT_FUNC inith5d(void)
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PyMODINIT_FUNC PyInit_h5d(void)
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{
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__pyx_init_filenames();
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__pyx_empty_bytes = PyString_FromStringAndSize("", 0); if (unlikely(!__pyx_empty_bytes)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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#else
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__pyx_empty_bytes = PyBytes_FromStringAndSize("", 0); if (unlikely(!__pyx_empty_bytes)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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PyEval_InitThreads();
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/*--- Module creation code ---*/
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__pyx_m = Py_InitModule4(__Pyx_NAMESTR("h5d"), __pyx_methods, __Pyx_DOCSTR(__pyx_k_7), 0, PYTHON_API_VERSION);
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__pyx_m = PyModule_Create(&__pyx_moduledef);
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if (!__pyx_m) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
|
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#if PY_MAJOR_VERSION < 3
|
|
Py_INCREF(__pyx_m);
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__pyx_b = PyImport_AddModule(__Pyx_NAMESTR(__Pyx_BUILTIN_MODULE_NAME));
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if (!__pyx_b) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
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if (__Pyx_SetAttrString(__pyx_m, "__builtins__", __pyx_b) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
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/*--- Initialize various global constants etc. ---*/
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if (unlikely(__Pyx_InitGlobals() < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_SetAttrString(__pyx_m, "__name__", __pyx_n_s____main__) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
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}
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/*--- Builtin init code ---*/
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if (unlikely(__Pyx_InitCachedBuiltins() < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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/*--- Global init code ---*/
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/*--- Function export code ---*/
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/*--- Type init code ---*/
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__pyx_ptype_4h5py_2h5_ObjectID = __Pyx_ImportType("h5py.h5", "ObjectID", sizeof(struct __pyx_obj_4h5py_2h5_ObjectID)); if (unlikely(!__pyx_ptype_4h5py_2h5_ObjectID)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_type_4h5py_3h5d_DatasetID.tp_base = __pyx_ptype_4h5py_2h5_ObjectID;
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if (PyType_Ready(&__pyx_type_4h5py_3h5d_DatasetID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 105; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_SetAttrString(__pyx_m, "DatasetID", (PyObject *)&__pyx_type_4h5py_3h5d_DatasetID) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 105; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (__pyx_type_4h5py_3h5d_DatasetID.tp_weaklistoffset == 0) __pyx_type_4h5py_3h5d_DatasetID.tp_weaklistoffset = offsetof(struct __pyx_obj_4h5py_3h5d_DatasetID, __pyx_base.__weakref__);
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|
__pyx_ptype_4h5py_3h5d_DatasetID = &__pyx_type_4h5py_3h5d_DatasetID;
|
|
/*--- Type import code ---*/
|
|
__pyx_ptype_4h5py_2h5_H5PYConfig = __Pyx_ImportType("h5py.h5", "H5PYConfig", sizeof(struct __pyx_obj_4h5py_2h5_H5PYConfig)); if (unlikely(!__pyx_ptype_4h5py_2h5_H5PYConfig)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_2h5_SmartStruct = __Pyx_ImportType("h5py.h5", "SmartStruct", sizeof(struct __pyx_obj_4h5py_2h5_SmartStruct)); if (unlikely(!__pyx_ptype_4h5py_2h5_SmartStruct)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 35; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_5numpy_dtype = __Pyx_ImportType("numpy", "dtype", sizeof(PyArray_Descr)); if (unlikely(!__pyx_ptype_4h5py_5numpy_dtype)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_5numpy_ndarray = __Pyx_ImportType("numpy", "ndarray", sizeof(PyArrayObject)); if (unlikely(!__pyx_ptype_4h5py_5numpy_ndarray)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 74; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeID = __Pyx_ImportType("h5py.h5t", "TypeID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeArrayID = __Pyx_ImportType("h5py.h5t", "TypeArrayID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeArrayID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeArrayID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 23; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeArrayID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeArrayID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 23; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5t_TypeOpaqueID = __Pyx_ImportType("h5py.h5t", "TypeOpaqueID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeOpaqueID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeOpaqueID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeOpaqueID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeOpaqueID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeStringID = __Pyx_ImportType("h5py.h5t", "TypeStringID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeStringID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeStringID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 29; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeStringID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeStringID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 29; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5t_TypeVlenID = __Pyx_ImportType("h5py.h5t", "TypeVlenID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeVlenID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeVlenID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeVlenID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeVlenID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeTimeID = __Pyx_ImportType("h5py.h5t", "TypeTimeID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeTimeID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeTimeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 37; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeTimeID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeTimeID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 37; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5t_TypeBitfieldID = __Pyx_ImportType("h5py.h5t", "TypeBitfieldID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeBitfieldID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeBitfieldID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 40; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeBitfieldID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeBitfieldID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 40; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5t_TypeReferenceID = __Pyx_ImportType("h5py.h5t", "TypeReferenceID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeReferenceID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeReferenceID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 43; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeReferenceID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeReferenceID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 43; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeAtomicID = __Pyx_ImportType("h5py.h5t", "TypeAtomicID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeAtomicID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeAtomicID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeAtomicID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeAtomicID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeIntegerID = __Pyx_ImportType("h5py.h5t", "TypeIntegerID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeIntegerID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeIntegerID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeIntegerID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeIntegerID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeFloatID = __Pyx_ImportType("h5py.h5t", "TypeFloatID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeFloatID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeFloatID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeFloatID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeFloatID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5t_TypeCompositeID = __Pyx_ImportType("h5py.h5t", "TypeCompositeID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeCompositeID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeCompositeID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeCompositeID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeCompositeID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5t_TypeEnumID = __Pyx_ImportType("h5py.h5t", "TypeEnumID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeEnumID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeEnumID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 62; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeEnumID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeEnumID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 62; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_4h5py_3h5t_TypeCompoundID = __Pyx_ImportType("h5py.h5t", "TypeCompoundID", sizeof(struct __pyx_obj_4h5py_3h5t_TypeCompoundID)); if (unlikely(!__pyx_ptype_4h5py_3h5t_TypeCompoundID)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (__Pyx_GetVtable(__pyx_ptype_4h5py_3h5t_TypeCompoundID->tp_dict, &__pyx_vtabptr_4h5py_3h5t_TypeCompoundID) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5s_SpaceID = __Pyx_ImportType("h5py.h5s", "SpaceID", sizeof(struct __pyx_obj_4h5py_3h5s_SpaceID)); if (unlikely(!__pyx_ptype_4h5py_3h5s_SpaceID)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5p_PropID = __Pyx_ImportType("h5py.h5p", "PropID", sizeof(struct __pyx_obj_4h5py_3h5p_PropID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 23; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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|
__pyx_ptype_4h5py_3h5p_PropClassID = __Pyx_ImportType("h5py.h5p", "PropClassID", sizeof(struct __pyx_obj_4h5py_3h5p_PropClassID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropClassID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__pyx_ptype_4h5py_3h5p_PropInstanceID = __Pyx_ImportType("h5py.h5p", "PropInstanceID", sizeof(struct __pyx_obj_4h5py_3h5p_PropInstanceID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropInstanceID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_4h5py_3h5p_PropCreateID = __Pyx_ImportType("h5py.h5p", "PropCreateID", sizeof(struct __pyx_obj_4h5py_3h5p_PropCreateID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropCreateID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_4h5py_3h5p_PropCopyID = __Pyx_ImportType("h5py.h5p", "PropCopyID", sizeof(struct __pyx_obj_4h5py_3h5p_PropCopyID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropCopyID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 46; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_4h5py_3h5p_PropDCID = __Pyx_ImportType("h5py.h5p", "PropDCID", sizeof(struct __pyx_obj_4h5py_3h5p_PropDCID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropDCID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5p_PropFCID = __Pyx_ImportType("h5py.h5p", "PropFCID", sizeof(struct __pyx_obj_4h5py_3h5p_PropFCID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropFCID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 55; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5p_PropFAID = __Pyx_ImportType("h5py.h5p", "PropFAID", sizeof(struct __pyx_obj_4h5py_3h5p_PropFAID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropFAID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 62; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__pyx_ptype_4h5py_3h5p_PropDXID = __Pyx_ImportType("h5py.h5p", "PropDXID", sizeof(struct __pyx_obj_4h5py_3h5p_PropDXID)); if (unlikely(!__pyx_ptype_4h5py_3h5p_PropDXID)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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/*--- Function import code ---*/
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__pyx_t_1 = __Pyx_ImportModule("h5py.h5"); if (!__pyx_t_1) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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if (__Pyx_ImportFunction(__pyx_t_1, "get_config", (void (**)(void))&__pyx_f_4h5py_2h5_get_config, "struct __pyx_obj_4h5py_2h5_H5PYConfig *(int __pyx_skip_dispatch)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (__Pyx_ImportFunction(__pyx_t_1, "init_hdf5", (void (**)(void))&__pyx_f_4h5py_2h5_init_hdf5, "int (void)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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Py_DECREF(__pyx_t_1); __pyx_t_1 = 0;
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__pyx_t_2 = __Pyx_ImportModule("h5py.utils"); if (!__pyx_t_2) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "emalloc", (void (**)(void))&__pyx_f_4h5py_5utils_emalloc, "void *(size_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "efree", (void (**)(void))&__pyx_f_4h5py_5utils_efree, "void (void *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "check_numpy_read", (void (**)(void))&__pyx_f_4h5py_5utils_check_numpy_read, "int (PyArrayObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_5utils_check_numpy_read *__pyx_optional_args)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "check_numpy_write", (void (**)(void))&__pyx_f_4h5py_5utils_check_numpy_write, "int (PyArrayObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_5utils_check_numpy_write *__pyx_optional_args)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "convert_tuple", (void (**)(void))&__pyx_f_4h5py_5utils_convert_tuple, "int (PyObject *, hsize_t *, hsize_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "convert_dims", (void (**)(void))&__pyx_f_4h5py_5utils_convert_dims, "PyObject *(hsize_t *, hsize_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "require_tuple", (void (**)(void))&__pyx_f_4h5py_5utils_require_tuple, "int (PyObject *, int, int, char *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "create_numpy_hsize", (void (**)(void))&__pyx_f_4h5py_5utils_create_numpy_hsize, "PyObject *(int, hsize_t *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_2, "create_hsize_array", (void (**)(void))&__pyx_f_4h5py_5utils_create_hsize_array, "PyObject *(PyObject *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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Py_DECREF(__pyx_t_2); __pyx_t_2 = 0;
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__pyx_t_3 = __Pyx_ImportModule("h5py.h5t"); if (!__pyx_t_3) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_3, "typewrap", (void (**)(void))&__pyx_f_4h5py_3h5t_typewrap, "struct __pyx_obj_4h5py_3h5t_TypeID *(hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_3, "py_create", (void (**)(void))&__pyx_f_4h5py_3h5t_py_create, "struct __pyx_obj_4h5py_3h5t_TypeID *(PyObject *, int __pyx_skip_dispatch, struct __pyx_opt_args_4h5py_3h5t_py_create *__pyx_optional_args)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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Py_DECREF(__pyx_t_3); __pyx_t_3 = 0;
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__pyx_t_4 = __Pyx_ImportModule("h5py.h5p"); if (!__pyx_t_4) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_4, "pdefault", (void (**)(void))&__pyx_f_4h5py_3h5p_pdefault, "hid_t (struct __pyx_obj_4h5py_3h5p_PropID *)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_4, "propwrap", (void (**)(void))&__pyx_f_4h5py_3h5p_propwrap, "PyObject *(hid_t)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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Py_DECREF(__pyx_t_4); __pyx_t_4 = 0;
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__pyx_t_5 = __Pyx_ImportModule("h5py._proxy"); if (!__pyx_t_5) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_5, "attr_rw", (void (**)(void))&__pyx_f_4h5py_6_proxy_attr_rw, "herr_t (hid_t, hid_t, void *, int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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if (__Pyx_ImportFunction(__pyx_t_5, "dset_rw", (void (**)(void))&__pyx_f_4h5py_6_proxy_dset_rw, "herr_t (hid_t, hid_t, hid_t, hid_t, hid_t, void *, int)") < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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Py_DECREF(__pyx_t_5); __pyx_t_5 = 0;
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/*--- Execution code ---*/
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":30
|
|
*
|
|
* # Initialization
|
|
* import_array() # <<<<<<<<<<<<<<
|
|
* init_hdf5()
|
|
*
|
|
*/
|
|
import_array();
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":31
|
|
* # Initialization
|
|
* import_array()
|
|
* init_hdf5() # <<<<<<<<<<<<<<
|
|
*
|
|
* # === Public constants and data structures ====================================
|
|
*/
|
|
__pyx_t_6 = __pyx_f_4h5py_2h5_init_hdf5(); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 31; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":35
|
|
* # === Public constants and data structures ====================================
|
|
*
|
|
* COMPACT = H5D_COMPACT # <<<<<<<<<<<<<<
|
|
* CONTIGUOUS = H5D_CONTIGUOUS
|
|
* CHUNKED = H5D_CHUNKED
|
|
*/
|
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__pyx_t_7 = PyInt_FromLong(H5D_COMPACT); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 35; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__COMPACT, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 35; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":36
|
|
*
|
|
* COMPACT = H5D_COMPACT
|
|
* CONTIGUOUS = H5D_CONTIGUOUS # <<<<<<<<<<<<<<
|
|
* CHUNKED = H5D_CHUNKED
|
|
*
|
|
*/
|
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__pyx_t_7 = PyInt_FromLong(H5D_CONTIGUOUS); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 36; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__CONTIGUOUS, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 36; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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|
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":37
|
|
* COMPACT = H5D_COMPACT
|
|
* CONTIGUOUS = H5D_CONTIGUOUS
|
|
* CHUNKED = H5D_CHUNKED # <<<<<<<<<<<<<<
|
|
*
|
|
* ALLOC_TIME_DEFAULT = H5D_ALLOC_TIME_DEFAULT
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_CHUNKED); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 37; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__CHUNKED, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 37; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":39
|
|
* CHUNKED = H5D_CHUNKED
|
|
*
|
|
* ALLOC_TIME_DEFAULT = H5D_ALLOC_TIME_DEFAULT # <<<<<<<<<<<<<<
|
|
* ALLOC_TIME_LATE = H5D_ALLOC_TIME_LATE
|
|
* ALLOC_TIME_EARLY = H5D_ALLOC_TIME_EARLY
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_ALLOC_TIME_DEFAULT); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__ALLOC_TIME_DEFAULT, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":40
|
|
*
|
|
* ALLOC_TIME_DEFAULT = H5D_ALLOC_TIME_DEFAULT
|
|
* ALLOC_TIME_LATE = H5D_ALLOC_TIME_LATE # <<<<<<<<<<<<<<
|
|
* ALLOC_TIME_EARLY = H5D_ALLOC_TIME_EARLY
|
|
* ALLOC_TIME_INCR = H5D_ALLOC_TIME_INCR
|
|
*/
|
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__pyx_t_7 = PyInt_FromLong(H5D_ALLOC_TIME_LATE); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 40; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__ALLOC_TIME_LATE, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 40; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":41
|
|
* ALLOC_TIME_DEFAULT = H5D_ALLOC_TIME_DEFAULT
|
|
* ALLOC_TIME_LATE = H5D_ALLOC_TIME_LATE
|
|
* ALLOC_TIME_EARLY = H5D_ALLOC_TIME_EARLY # <<<<<<<<<<<<<<
|
|
* ALLOC_TIME_INCR = H5D_ALLOC_TIME_INCR
|
|
*
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_ALLOC_TIME_EARLY); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 41; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__ALLOC_TIME_EARLY, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 41; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":42
|
|
* ALLOC_TIME_LATE = H5D_ALLOC_TIME_LATE
|
|
* ALLOC_TIME_EARLY = H5D_ALLOC_TIME_EARLY
|
|
* ALLOC_TIME_INCR = H5D_ALLOC_TIME_INCR # <<<<<<<<<<<<<<
|
|
*
|
|
* SPACE_STATUS_NOT_ALLOCATED = H5D_SPACE_STATUS_NOT_ALLOCATED
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_ALLOC_TIME_INCR); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 42; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__ALLOC_TIME_INCR, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 42; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":44
|
|
* ALLOC_TIME_INCR = H5D_ALLOC_TIME_INCR
|
|
*
|
|
* SPACE_STATUS_NOT_ALLOCATED = H5D_SPACE_STATUS_NOT_ALLOCATED # <<<<<<<<<<<<<<
|
|
* SPACE_STATUS_PART_ALLOCATED = H5D_SPACE_STATUS_PART_ALLOCATED
|
|
* SPACE_STATUS_ALLOCATED = H5D_SPACE_STATUS_ALLOCATED
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_SPACE_STATUS_NOT_ALLOCATED); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s_8, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
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|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":45
|
|
*
|
|
* SPACE_STATUS_NOT_ALLOCATED = H5D_SPACE_STATUS_NOT_ALLOCATED
|
|
* SPACE_STATUS_PART_ALLOCATED = H5D_SPACE_STATUS_PART_ALLOCATED # <<<<<<<<<<<<<<
|
|
* SPACE_STATUS_ALLOCATED = H5D_SPACE_STATUS_ALLOCATED
|
|
*
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_SPACE_STATUS_PART_ALLOCATED); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 45; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s_9, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 45; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":46
|
|
* SPACE_STATUS_NOT_ALLOCATED = H5D_SPACE_STATUS_NOT_ALLOCATED
|
|
* SPACE_STATUS_PART_ALLOCATED = H5D_SPACE_STATUS_PART_ALLOCATED
|
|
* SPACE_STATUS_ALLOCATED = H5D_SPACE_STATUS_ALLOCATED # <<<<<<<<<<<<<<
|
|
*
|
|
* FILL_TIME_ALLOC = H5D_FILL_TIME_ALLOC
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_SPACE_STATUS_ALLOCATED); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 46; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s_10, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 46; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":48
|
|
* SPACE_STATUS_ALLOCATED = H5D_SPACE_STATUS_ALLOCATED
|
|
*
|
|
* FILL_TIME_ALLOC = H5D_FILL_TIME_ALLOC # <<<<<<<<<<<<<<
|
|
* FILL_TIME_NEVER = H5D_FILL_TIME_NEVER
|
|
* FILL_TIME_IFSET = H5D_FILL_TIME_IFSET
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_FILL_TIME_ALLOC); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__FILL_TIME_ALLOC, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":49
|
|
*
|
|
* FILL_TIME_ALLOC = H5D_FILL_TIME_ALLOC
|
|
* FILL_TIME_NEVER = H5D_FILL_TIME_NEVER # <<<<<<<<<<<<<<
|
|
* FILL_TIME_IFSET = H5D_FILL_TIME_IFSET
|
|
*
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_FILL_TIME_NEVER); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 49; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__FILL_TIME_NEVER, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 49; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":50
|
|
* FILL_TIME_ALLOC = H5D_FILL_TIME_ALLOC
|
|
* FILL_TIME_NEVER = H5D_FILL_TIME_NEVER
|
|
* FILL_TIME_IFSET = H5D_FILL_TIME_IFSET # <<<<<<<<<<<<<<
|
|
*
|
|
* FILL_VALUE_UNDEFINED = H5D_FILL_VALUE_UNDEFINED
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_FILL_TIME_IFSET); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 50; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s__FILL_TIME_IFSET, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 50; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":52
|
|
* FILL_TIME_IFSET = H5D_FILL_TIME_IFSET
|
|
*
|
|
* FILL_VALUE_UNDEFINED = H5D_FILL_VALUE_UNDEFINED # <<<<<<<<<<<<<<
|
|
* FILL_VALUE_DEFAULT = H5D_FILL_VALUE_DEFAULT
|
|
* FILL_VALUE_USER_DEFINED = H5D_FILL_VALUE_USER_DEFINED
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_FILL_VALUE_UNDEFINED); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 52; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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__Pyx_GOTREF(__pyx_t_7);
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if (PyObject_SetAttr(__pyx_m, __pyx_n_s_11, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 52; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
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|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":53
|
|
*
|
|
* FILL_VALUE_UNDEFINED = H5D_FILL_VALUE_UNDEFINED
|
|
* FILL_VALUE_DEFAULT = H5D_FILL_VALUE_DEFAULT # <<<<<<<<<<<<<<
|
|
* FILL_VALUE_USER_DEFINED = H5D_FILL_VALUE_USER_DEFINED
|
|
*
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_FILL_VALUE_DEFAULT); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 53; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
if (PyObject_SetAttr(__pyx_m, __pyx_n_s__FILL_VALUE_DEFAULT, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 53; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/h5d.pyx":54
|
|
* FILL_VALUE_UNDEFINED = H5D_FILL_VALUE_UNDEFINED
|
|
* FILL_VALUE_DEFAULT = H5D_FILL_VALUE_DEFAULT
|
|
* FILL_VALUE_USER_DEFINED = H5D_FILL_VALUE_USER_DEFINED # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__pyx_t_7 = PyInt_FromLong(H5D_FILL_VALUE_USER_DEFINED); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
if (PyObject_SetAttr(__pyx_m, __pyx_n_s_12, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
|
|
/* "/home/tachyon/slave/unix-release/build/h5py/numpy.pxd":1
|
|
* #+ # <<<<<<<<<<<<<<
|
|
* #
|
|
* # This file is part of h5py, a low-level Python interface to the HDF5 library.
|
|
*/
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_XDECREF(__pyx_t_2);
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_XDECREF(__pyx_t_5);
|
|
__Pyx_XDECREF(__pyx_t_7);
|
|
if (__pyx_m) {
|
|
__Pyx_AddTraceback("init h5py.h5d");
|
|
Py_DECREF(__pyx_m); __pyx_m = 0;
|
|
} else if (!PyErr_Occurred()) {
|
|
PyErr_SetString(PyExc_ImportError, "init h5py.h5d");
|
|
}
|
|
__pyx_L0:;
|
|
__Pyx_RefNannyFinishContext();
|
|
#if PY_MAJOR_VERSION < 3
|
|
return;
|
|
#else
|
|
return __pyx_m;
|
|
#endif
|
|
}
|
|
|
|
static const char *__pyx_filenames[] = {
|
|
"h5d.pyx",
|
|
"h5.pxd",
|
|
"numpy.pxd",
|
|
"h5t.pxd",
|
|
"h5s.pxd",
|
|
"h5p.pxd",
|
|
};
|
|
|
|
/* Runtime support code */
|
|
|
|
static void __pyx_init_filenames(void) {
|
|
__pyx_f = __pyx_filenames;
|
|
}
|
|
|
|
static void __Pyx_RaiseDoubleKeywordsError(
|
|
const char* func_name,
|
|
PyObject* kw_name)
|
|
{
|
|
PyErr_Format(PyExc_TypeError,
|
|
#if PY_MAJOR_VERSION >= 3
|
|
"%s() got multiple values for keyword argument '%U'", func_name, kw_name);
|
|
#else
|
|
"%s() got multiple values for keyword argument '%s'", func_name,
|
|
PyString_AS_STRING(kw_name));
|
|
#endif
|
|
}
|
|
|
|
static void __Pyx_RaiseArgtupleInvalid(
|
|
const char* func_name,
|
|
int exact,
|
|
Py_ssize_t num_min,
|
|
Py_ssize_t num_max,
|
|
Py_ssize_t num_found)
|
|
{
|
|
Py_ssize_t num_expected;
|
|
const char *number, *more_or_less;
|
|
|
|
if (num_found < num_min) {
|
|
num_expected = num_min;
|
|
more_or_less = "at least";
|
|
} else {
|
|
num_expected = num_max;
|
|
more_or_less = "at most";
|
|
}
|
|
if (exact) {
|
|
more_or_less = "exactly";
|
|
}
|
|
number = (num_expected == 1) ? "" : "s";
|
|
PyErr_Format(PyExc_TypeError,
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
"%s() takes %s %d positional argument%s (%d given)",
|
|
#else
|
|
"%s() takes %s %zd positional argument%s (%zd given)",
|
|
#endif
|
|
func_name, more_or_less, num_expected, number, num_found);
|
|
}
|
|
|
|
static int __Pyx_ParseOptionalKeywords(
|
|
PyObject *kwds,
|
|
PyObject **argnames[],
|
|
PyObject *kwds2,
|
|
PyObject *values[],
|
|
Py_ssize_t num_pos_args,
|
|
const char* function_name)
|
|
{
|
|
PyObject *key = 0, *value = 0;
|
|
Py_ssize_t pos = 0;
|
|
PyObject*** name;
|
|
PyObject*** first_kw_arg = argnames + num_pos_args;
|
|
|
|
while (PyDict_Next(kwds, &pos, &key, &value)) {
|
|
name = first_kw_arg;
|
|
while (*name && (**name != key)) name++;
|
|
if (*name) {
|
|
values[name-argnames] = value;
|
|
} else {
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (unlikely(!PyString_CheckExact(key)) && unlikely(!PyString_Check(key))) {
|
|
#else
|
|
if (unlikely(!PyUnicode_CheckExact(key)) && unlikely(!PyUnicode_Check(key))) {
|
|
#endif
|
|
goto invalid_keyword_type;
|
|
} else {
|
|
for (name = first_kw_arg; *name; name++) {
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (PyUnicode_GET_SIZE(**name) == PyUnicode_GET_SIZE(key) &&
|
|
PyUnicode_Compare(**name, key) == 0) break;
|
|
#else
|
|
if (PyString_GET_SIZE(**name) == PyString_GET_SIZE(key) &&
|
|
_PyString_Eq(**name, key)) break;
|
|
#endif
|
|
}
|
|
if (*name) {
|
|
values[name-argnames] = value;
|
|
} else {
|
|
/* unexpected keyword found */
|
|
for (name=argnames; name != first_kw_arg; name++) {
|
|
if (**name == key) goto arg_passed_twice;
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (PyUnicode_GET_SIZE(**name) == PyUnicode_GET_SIZE(key) &&
|
|
PyUnicode_Compare(**name, key) == 0) goto arg_passed_twice;
|
|
#else
|
|
if (PyString_GET_SIZE(**name) == PyString_GET_SIZE(key) &&
|
|
_PyString_Eq(**name, key)) goto arg_passed_twice;
|
|
#endif
|
|
}
|
|
if (kwds2) {
|
|
if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
|
|
} else {
|
|
goto invalid_keyword;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
}
|
|
return 0;
|
|
arg_passed_twice:
|
|
__Pyx_RaiseDoubleKeywordsError(function_name, **name);
|
|
goto bad;
|
|
invalid_keyword_type:
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%s() keywords must be strings", function_name);
|
|
goto bad;
|
|
invalid_keyword:
|
|
PyErr_Format(PyExc_TypeError,
|
|
#if PY_MAJOR_VERSION < 3
|
|
"%s() got an unexpected keyword argument '%s'",
|
|
function_name, PyString_AsString(key));
|
|
#else
|
|
"%s() got an unexpected keyword argument '%U'",
|
|
function_name, key);
|
|
#endif
|
|
bad:
|
|
return -1;
|
|
}
|
|
|
|
static INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
|
|
if (unlikely(!type)) {
|
|
PyErr_Format(PyExc_SystemError, "Missing type object");
|
|
return 0;
|
|
}
|
|
if (likely(PyObject_TypeCheck(obj, type)))
|
|
return 1;
|
|
PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s",
|
|
Py_TYPE(obj)->tp_name, type->tp_name);
|
|
return 0;
|
|
}
|
|
|
|
static INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
|
|
tmp_type = tstate->curexc_type;
|
|
tmp_value = tstate->curexc_value;
|
|
tmp_tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = type;
|
|
tstate->curexc_value = value;
|
|
tstate->curexc_traceback = tb;
|
|
Py_XDECREF(tmp_type);
|
|
Py_XDECREF(tmp_value);
|
|
Py_XDECREF(tmp_tb);
|
|
}
|
|
|
|
static INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
*type = tstate->curexc_type;
|
|
*value = tstate->curexc_value;
|
|
*tb = tstate->curexc_traceback;
|
|
|
|
tstate->curexc_type = 0;
|
|
tstate->curexc_value = 0;
|
|
tstate->curexc_traceback = 0;
|
|
}
|
|
|
|
|
|
static int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
|
|
const char *name, int exact)
|
|
{
|
|
if (!type) {
|
|
PyErr_Format(PyExc_SystemError, "Missing type object");
|
|
return 0;
|
|
}
|
|
if (none_allowed && obj == Py_None) return 1;
|
|
else if (exact) {
|
|
if (Py_TYPE(obj) == type) return 1;
|
|
}
|
|
else {
|
|
if (PyObject_TypeCheck(obj, type)) return 1;
|
|
}
|
|
PyErr_Format(PyExc_TypeError,
|
|
"Argument '%s' has incorrect type (expected %s, got %s)",
|
|
name, type->tp_name, Py_TYPE(obj)->tp_name);
|
|
return 0;
|
|
}
|
|
|
|
static INLINE PyObject *__Pyx_PyInt_to_py_hid_t(hid_t val) {
|
|
const hid_t neg_one = (hid_t)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(hid_t) < sizeof(long)) {
|
|
return PyInt_FromLong((long)val);
|
|
} else if (sizeof(hid_t) == sizeof(long)) {
|
|
if (is_unsigned)
|
|
return PyLong_FromUnsignedLong((unsigned long)val);
|
|
else
|
|
return PyInt_FromLong((long)val);
|
|
} else { /* (sizeof(hid_t) > sizeof(long)) */
|
|
if (is_unsigned)
|
|
return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
|
|
else
|
|
return PyLong_FromLongLong((PY_LONG_LONG)val);
|
|
}
|
|
}
|
|
|
|
static PyObject *__Pyx_GetName(PyObject *dict, PyObject *name) {
|
|
PyObject *result;
|
|
result = PyObject_GetAttr(dict, name);
|
|
if (!result)
|
|
PyErr_SetObject(PyExc_NameError, name);
|
|
return result;
|
|
}
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb) {
|
|
Py_XINCREF(type);
|
|
Py_XINCREF(value);
|
|
Py_XINCREF(tb);
|
|
/* First, check the traceback argument, replacing None with NULL. */
|
|
if (tb == Py_None) {
|
|
Py_DECREF(tb);
|
|
tb = 0;
|
|
}
|
|
else if (tb != NULL && !PyTraceBack_Check(tb)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: arg 3 must be a traceback or None");
|
|
goto raise_error;
|
|
}
|
|
/* Next, replace a missing value with None */
|
|
if (value == NULL) {
|
|
value = Py_None;
|
|
Py_INCREF(value);
|
|
}
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
if (!PyClass_Check(type))
|
|
#else
|
|
if (!PyType_Check(type))
|
|
#endif
|
|
{
|
|
/* Raising an instance. The value should be a dummy. */
|
|
if (value != Py_None) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"instance exception may not have a separate value");
|
|
goto raise_error;
|
|
}
|
|
/* Normalize to raise <class>, <instance> */
|
|
Py_DECREF(value);
|
|
value = type;
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
if (PyInstance_Check(type)) {
|
|
type = (PyObject*) ((PyInstanceObject*)type)->in_class;
|
|
Py_INCREF(type);
|
|
}
|
|
else {
|
|
type = 0;
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception must be an old-style class or instance");
|
|
goto raise_error;
|
|
}
|
|
#else
|
|
type = (PyObject*) Py_TYPE(type);
|
|
Py_INCREF(type);
|
|
if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception class must be a subclass of BaseException");
|
|
goto raise_error;
|
|
}
|
|
#endif
|
|
}
|
|
|
|
__Pyx_ErrRestore(type, value, tb);
|
|
return;
|
|
raise_error:
|
|
Py_XDECREF(value);
|
|
Py_XDECREF(type);
|
|
Py_XDECREF(tb);
|
|
return;
|
|
}
|
|
|
|
#else /* Python 3+ */
|
|
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb) {
|
|
if (tb == Py_None) {
|
|
tb = 0;
|
|
} else if (tb && !PyTraceBack_Check(tb)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: arg 3 must be a traceback or None");
|
|
goto bad;
|
|
}
|
|
if (value == Py_None)
|
|
value = 0;
|
|
|
|
if (PyExceptionInstance_Check(type)) {
|
|
if (value) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"instance exception may not have a separate value");
|
|
goto bad;
|
|
}
|
|
value = type;
|
|
type = (PyObject*) Py_TYPE(value);
|
|
} else if (!PyExceptionClass_Check(type)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception class must be a subclass of BaseException");
|
|
goto bad;
|
|
}
|
|
|
|
PyErr_SetObject(type, value);
|
|
|
|
if (tb) {
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
PyObject* tmp_tb = tstate->curexc_traceback;
|
|
if (tb != tmp_tb) {
|
|
Py_INCREF(tb);
|
|
tstate->curexc_traceback = tb;
|
|
Py_XDECREF(tmp_tb);
|
|
}
|
|
}
|
|
|
|
bad:
|
|
return;
|
|
}
|
|
#endif
|
|
|
|
static INLINE PyObject *__Pyx_PyInt_to_py_haddr_t(haddr_t val) {
|
|
const haddr_t neg_one = (haddr_t)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(haddr_t) < sizeof(long)) {
|
|
return PyInt_FromLong((long)val);
|
|
} else if (sizeof(haddr_t) == sizeof(long)) {
|
|
if (is_unsigned)
|
|
return PyLong_FromUnsignedLong((unsigned long)val);
|
|
else
|
|
return PyInt_FromLong((long)val);
|
|
} else { /* (sizeof(haddr_t) > sizeof(long)) */
|
|
if (is_unsigned)
|
|
return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
|
|
else
|
|
return PyLong_FromLongLong((PY_LONG_LONG)val);
|
|
}
|
|
}
|
|
|
|
static INLINE PyObject *__Pyx_PyInt_to_py_hsize_t(hsize_t val) {
|
|
const hsize_t neg_one = (hsize_t)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(hsize_t) < sizeof(long)) {
|
|
return PyInt_FromLong((long)val);
|
|
} else if (sizeof(hsize_t) == sizeof(long)) {
|
|
if (is_unsigned)
|
|
return PyLong_FromUnsignedLong((unsigned long)val);
|
|
else
|
|
return PyInt_FromLong((long)val);
|
|
} else { /* (sizeof(hsize_t) > sizeof(long)) */
|
|
if (is_unsigned)
|
|
return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG)val);
|
|
else
|
|
return PyLong_FromLongLong((PY_LONG_LONG)val);
|
|
}
|
|
}
|
|
|
|
static INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) {
|
|
const unsigned char neg_one = (unsigned char)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(unsigned char) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(unsigned char)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to unsigned char" :
|
|
"value too large to convert to unsigned char");
|
|
}
|
|
return (unsigned char)-1;
|
|
}
|
|
return (unsigned char)val;
|
|
}
|
|
return (unsigned char)__Pyx_PyInt_AsUnsignedLong(x);
|
|
}
|
|
|
|
static INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject* x) {
|
|
const unsigned short neg_one = (unsigned short)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(unsigned short) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(unsigned short)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to unsigned short" :
|
|
"value too large to convert to unsigned short");
|
|
}
|
|
return (unsigned short)-1;
|
|
}
|
|
return (unsigned short)val;
|
|
}
|
|
return (unsigned short)__Pyx_PyInt_AsUnsignedLong(x);
|
|
}
|
|
|
|
static INLINE unsigned int __Pyx_PyInt_AsUnsignedInt(PyObject* x) {
|
|
const unsigned int neg_one = (unsigned int)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(unsigned int) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(unsigned int)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to unsigned int" :
|
|
"value too large to convert to unsigned int");
|
|
}
|
|
return (unsigned int)-1;
|
|
}
|
|
return (unsigned int)val;
|
|
}
|
|
return (unsigned int)__Pyx_PyInt_AsUnsignedLong(x);
|
|
}
|
|
|
|
static INLINE char __Pyx_PyInt_AsChar(PyObject* x) {
|
|
const char neg_one = (char)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(char) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(char)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to char" :
|
|
"value too large to convert to char");
|
|
}
|
|
return (char)-1;
|
|
}
|
|
return (char)val;
|
|
}
|
|
return (char)__Pyx_PyInt_AsLong(x);
|
|
}
|
|
|
|
static INLINE short __Pyx_PyInt_AsShort(PyObject* x) {
|
|
const short neg_one = (short)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(short) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(short)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to short" :
|
|
"value too large to convert to short");
|
|
}
|
|
return (short)-1;
|
|
}
|
|
return (short)val;
|
|
}
|
|
return (short)__Pyx_PyInt_AsLong(x);
|
|
}
|
|
|
|
static INLINE int __Pyx_PyInt_AsInt(PyObject* x) {
|
|
const int neg_one = (int)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(int) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(int)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to int" :
|
|
"value too large to convert to int");
|
|
}
|
|
return (int)-1;
|
|
}
|
|
return (int)val;
|
|
}
|
|
return (int)__Pyx_PyInt_AsLong(x);
|
|
}
|
|
|
|
static INLINE signed char __Pyx_PyInt_AsSignedChar(PyObject* x) {
|
|
const signed char neg_one = (signed char)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(signed char) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(signed char)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to signed char" :
|
|
"value too large to convert to signed char");
|
|
}
|
|
return (signed char)-1;
|
|
}
|
|
return (signed char)val;
|
|
}
|
|
return (signed char)__Pyx_PyInt_AsSignedLong(x);
|
|
}
|
|
|
|
static INLINE signed short __Pyx_PyInt_AsSignedShort(PyObject* x) {
|
|
const signed short neg_one = (signed short)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(signed short) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(signed short)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to signed short" :
|
|
"value too large to convert to signed short");
|
|
}
|
|
return (signed short)-1;
|
|
}
|
|
return (signed short)val;
|
|
}
|
|
return (signed short)__Pyx_PyInt_AsSignedLong(x);
|
|
}
|
|
|
|
static INLINE signed int __Pyx_PyInt_AsSignedInt(PyObject* x) {
|
|
const signed int neg_one = (signed int)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (sizeof(signed int) < sizeof(long)) {
|
|
long val = __Pyx_PyInt_AsLong(x);
|
|
if (unlikely(val != (long)(signed int)val)) {
|
|
if (!unlikely(val == -1 && PyErr_Occurred())) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
(is_unsigned && unlikely(val < 0)) ?
|
|
"can't convert negative value to signed int" :
|
|
"value too large to convert to signed int");
|
|
}
|
|
return (signed int)-1;
|
|
}
|
|
return (signed int)val;
|
|
}
|
|
return (signed int)__Pyx_PyInt_AsSignedLong(x);
|
|
}
|
|
|
|
static INLINE unsigned long __Pyx_PyInt_AsUnsignedLong(PyObject* x) {
|
|
const unsigned long neg_one = (unsigned long)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (likely(PyInt_Check(x))) {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to unsigned long");
|
|
return (unsigned long)-1;
|
|
}
|
|
return (unsigned long)val;
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to unsigned long");
|
|
return (unsigned long)-1;
|
|
}
|
|
return PyLong_AsUnsignedLong(x);
|
|
} else {
|
|
return PyLong_AsLong(x);
|
|
}
|
|
} else {
|
|
unsigned long val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (unsigned long)-1;
|
|
val = __Pyx_PyInt_AsUnsignedLong(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
static INLINE unsigned PY_LONG_LONG __Pyx_PyInt_AsUnsignedLongLong(PyObject* x) {
|
|
const unsigned PY_LONG_LONG neg_one = (unsigned PY_LONG_LONG)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (likely(PyInt_Check(x))) {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to unsigned PY_LONG_LONG");
|
|
return (unsigned PY_LONG_LONG)-1;
|
|
}
|
|
return (unsigned PY_LONG_LONG)val;
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to unsigned PY_LONG_LONG");
|
|
return (unsigned PY_LONG_LONG)-1;
|
|
}
|
|
return PyLong_AsUnsignedLongLong(x);
|
|
} else {
|
|
return PyLong_AsLongLong(x);
|
|
}
|
|
} else {
|
|
unsigned PY_LONG_LONG val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (unsigned PY_LONG_LONG)-1;
|
|
val = __Pyx_PyInt_AsUnsignedLongLong(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
static INLINE long __Pyx_PyInt_AsLong(PyObject* x) {
|
|
const long neg_one = (long)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (likely(PyInt_Check(x))) {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to long");
|
|
return (long)-1;
|
|
}
|
|
return (long)val;
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to long");
|
|
return (long)-1;
|
|
}
|
|
return PyLong_AsUnsignedLong(x);
|
|
} else {
|
|
return PyLong_AsLong(x);
|
|
}
|
|
} else {
|
|
long val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (long)-1;
|
|
val = __Pyx_PyInt_AsLong(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
static INLINE PY_LONG_LONG __Pyx_PyInt_AsLongLong(PyObject* x) {
|
|
const PY_LONG_LONG neg_one = (PY_LONG_LONG)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (likely(PyInt_Check(x))) {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to PY_LONG_LONG");
|
|
return (PY_LONG_LONG)-1;
|
|
}
|
|
return (PY_LONG_LONG)val;
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to PY_LONG_LONG");
|
|
return (PY_LONG_LONG)-1;
|
|
}
|
|
return PyLong_AsUnsignedLongLong(x);
|
|
} else {
|
|
return PyLong_AsLongLong(x);
|
|
}
|
|
} else {
|
|
PY_LONG_LONG val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (PY_LONG_LONG)-1;
|
|
val = __Pyx_PyInt_AsLongLong(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
static INLINE signed long __Pyx_PyInt_AsSignedLong(PyObject* x) {
|
|
const signed long neg_one = (signed long)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (likely(PyInt_Check(x))) {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to signed long");
|
|
return (signed long)-1;
|
|
}
|
|
return (signed long)val;
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to signed long");
|
|
return (signed long)-1;
|
|
}
|
|
return PyLong_AsUnsignedLong(x);
|
|
} else {
|
|
return PyLong_AsLong(x);
|
|
}
|
|
} else {
|
|
signed long val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (signed long)-1;
|
|
val = __Pyx_PyInt_AsSignedLong(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
static INLINE signed PY_LONG_LONG __Pyx_PyInt_AsSignedLongLong(PyObject* x) {
|
|
const signed PY_LONG_LONG neg_one = (signed PY_LONG_LONG)-1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (likely(PyInt_Check(x))) {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to signed PY_LONG_LONG");
|
|
return (signed PY_LONG_LONG)-1;
|
|
}
|
|
return (signed PY_LONG_LONG)val;
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to signed PY_LONG_LONG");
|
|
return (signed PY_LONG_LONG)-1;
|
|
}
|
|
return PyLong_AsUnsignedLongLong(x);
|
|
} else {
|
|
return PyLong_AsLongLong(x);
|
|
}
|
|
} else {
|
|
signed PY_LONG_LONG val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (signed PY_LONG_LONG)-1;
|
|
val = __Pyx_PyInt_AsSignedLongLong(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
#ifndef __PYX_HAVE_RT_ImportType
|
|
#define __PYX_HAVE_RT_ImportType
|
|
static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
|
|
long size)
|
|
{
|
|
PyObject *py_module = 0;
|
|
PyObject *result = 0;
|
|
PyObject *py_name = 0;
|
|
|
|
py_module = __Pyx_ImportModule(module_name);
|
|
if (!py_module)
|
|
goto bad;
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_name = PyString_FromString(class_name);
|
|
#else
|
|
py_name = PyUnicode_FromString(class_name);
|
|
#endif
|
|
if (!py_name)
|
|
goto bad;
|
|
result = PyObject_GetAttr(py_module, py_name);
|
|
Py_DECREF(py_name);
|
|
py_name = 0;
|
|
Py_DECREF(py_module);
|
|
py_module = 0;
|
|
if (!result)
|
|
goto bad;
|
|
if (!PyType_Check(result)) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%s.%s is not a type object",
|
|
module_name, class_name);
|
|
goto bad;
|
|
}
|
|
if (((PyTypeObject *)result)->tp_basicsize != size) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"%s.%s does not appear to be the correct type object",
|
|
module_name, class_name);
|
|
goto bad;
|
|
}
|
|
return (PyTypeObject *)result;
|
|
bad:
|
|
Py_XDECREF(py_module);
|
|
Py_XDECREF(result);
|
|
return 0;
|
|
}
|
|
#endif
|
|
|
|
#ifndef __PYX_HAVE_RT_ImportModule
|
|
#define __PYX_HAVE_RT_ImportModule
|
|
static PyObject *__Pyx_ImportModule(const char *name) {
|
|
PyObject *py_name = 0;
|
|
PyObject *py_module = 0;
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_name = PyString_FromString(name);
|
|
#else
|
|
py_name = PyUnicode_FromString(name);
|
|
#endif
|
|
if (!py_name)
|
|
goto bad;
|
|
py_module = PyImport_Import(py_name);
|
|
Py_DECREF(py_name);
|
|
return py_module;
|
|
bad:
|
|
Py_XDECREF(py_name);
|
|
return 0;
|
|
}
|
|
#endif
|
|
|
|
static int __Pyx_GetVtable(PyObject *dict, void *vtabptr) {
|
|
PyObject *ob = PyMapping_GetItemString(dict, (char *)"__pyx_vtable__");
|
|
if (!ob)
|
|
goto bad;
|
|
#if PY_VERSION_HEX < 0x03010000
|
|
*(void **)vtabptr = PyCObject_AsVoidPtr(ob);
|
|
#else
|
|
*(void **)vtabptr = PyCapsule_GetPointer(ob, 0);
|
|
#endif
|
|
if (!*(void **)vtabptr)
|
|
goto bad;
|
|
Py_DECREF(ob);
|
|
return 0;
|
|
bad:
|
|
Py_XDECREF(ob);
|
|
return -1;
|
|
}
|
|
|
|
#ifndef __PYX_HAVE_RT_ImportFunction
|
|
#define __PYX_HAVE_RT_ImportFunction
|
|
static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) {
|
|
PyObject *d = 0;
|
|
PyObject *cobj = 0;
|
|
union {
|
|
void (*fp)(void);
|
|
void *p;
|
|
} tmp;
|
|
#if PY_VERSION_HEX < 0x03010000
|
|
const char *desc, *s1, *s2;
|
|
#endif
|
|
|
|
d = PyObject_GetAttrString(module, (char *)"__pyx_capi__");
|
|
if (!d)
|
|
goto bad;
|
|
cobj = PyDict_GetItemString(d, funcname);
|
|
if (!cobj) {
|
|
PyErr_Format(PyExc_ImportError,
|
|
"%s does not export expected C function %s",
|
|
PyModule_GetName(module), funcname);
|
|
goto bad;
|
|
}
|
|
#if PY_VERSION_HEX < 0x03010000
|
|
desc = (const char *)PyCObject_GetDesc(cobj);
|
|
if (!desc)
|
|
goto bad;
|
|
s1 = desc; s2 = sig;
|
|
while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; }
|
|
if (*s1 != *s2) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"C function %s.%s has wrong signature (expected %s, got %s)",
|
|
PyModule_GetName(module), funcname, sig, desc);
|
|
goto bad;
|
|
}
|
|
tmp.p = PyCObject_AsVoidPtr(cobj);
|
|
#else
|
|
if (!PyCapsule_IsValid(cobj, sig)) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"C function %s.%s has wrong signature (expected %s, got %s)",
|
|
PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj));
|
|
goto bad;
|
|
}
|
|
tmp.p = PyCapsule_GetPointer(cobj, sig);
|
|
#endif
|
|
*f = tmp.fp;
|
|
if (!(*f))
|
|
goto bad;
|
|
Py_DECREF(d);
|
|
return 0;
|
|
bad:
|
|
Py_XDECREF(d);
|
|
return -1;
|
|
}
|
|
#endif
|
|
|
|
#include "compile.h"
|
|
#include "frameobject.h"
|
|
#include "traceback.h"
|
|
|
|
static void __Pyx_AddTraceback(const char *funcname) {
|
|
PyObject *py_srcfile = 0;
|
|
PyObject *py_funcname = 0;
|
|
PyObject *py_globals = 0;
|
|
PyCodeObject *py_code = 0;
|
|
PyFrameObject *py_frame = 0;
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_srcfile = PyString_FromString(__pyx_filename);
|
|
#else
|
|
py_srcfile = PyUnicode_FromString(__pyx_filename);
|
|
#endif
|
|
if (!py_srcfile) goto bad;
|
|
if (__pyx_clineno) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, __pyx_clineno);
|
|
#else
|
|
py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, __pyx_clineno);
|
|
#endif
|
|
}
|
|
else {
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_funcname = PyString_FromString(funcname);
|
|
#else
|
|
py_funcname = PyUnicode_FromString(funcname);
|
|
#endif
|
|
}
|
|
if (!py_funcname) goto bad;
|
|
py_globals = PyModule_GetDict(__pyx_m);
|
|
if (!py_globals) goto bad;
|
|
py_code = PyCode_New(
|
|
0, /*int argcount,*/
|
|
#if PY_MAJOR_VERSION >= 3
|
|
0, /*int kwonlyargcount,*/
|
|
#endif
|
|
0, /*int nlocals,*/
|
|
0, /*int stacksize,*/
|
|
0, /*int flags,*/
|
|
__pyx_empty_bytes, /*PyObject *code,*/
|
|
__pyx_empty_tuple, /*PyObject *consts,*/
|
|
__pyx_empty_tuple, /*PyObject *names,*/
|
|
__pyx_empty_tuple, /*PyObject *varnames,*/
|
|
__pyx_empty_tuple, /*PyObject *freevars,*/
|
|
__pyx_empty_tuple, /*PyObject *cellvars,*/
|
|
py_srcfile, /*PyObject *filename,*/
|
|
py_funcname, /*PyObject *name,*/
|
|
__pyx_lineno, /*int firstlineno,*/
|
|
__pyx_empty_bytes /*PyObject *lnotab*/
|
|
);
|
|
if (!py_code) goto bad;
|
|
py_frame = PyFrame_New(
|
|
PyThreadState_GET(), /*PyThreadState *tstate,*/
|
|
py_code, /*PyCodeObject *code,*/
|
|
py_globals, /*PyObject *globals,*/
|
|
0 /*PyObject *locals*/
|
|
);
|
|
if (!py_frame) goto bad;
|
|
py_frame->f_lineno = __pyx_lineno;
|
|
PyTraceBack_Here(py_frame);
|
|
bad:
|
|
Py_XDECREF(py_srcfile);
|
|
Py_XDECREF(py_funcname);
|
|
Py_XDECREF(py_code);
|
|
Py_XDECREF(py_frame);
|
|
}
|
|
|
|
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
|
|
while (t->p) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (t->is_unicode) {
|
|
*t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
|
|
} else if (t->intern) {
|
|
*t->p = PyString_InternFromString(t->s);
|
|
} else {
|
|
*t->p = PyString_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
#else /* Python 3+ has unicode identifiers */
|
|
if (t->is_unicode | t->is_str) {
|
|
if (t->intern) {
|
|
*t->p = PyUnicode_InternFromString(t->s);
|
|
} else if (t->encoding) {
|
|
*t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
|
|
} else {
|
|
*t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
} else {
|
|
*t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
#endif
|
|
if (!*t->p)
|
|
return -1;
|
|
++t;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
/* Type Conversion Functions */
|
|
|
|
static INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
|
|
if (x == Py_True) return 1;
|
|
else if ((x == Py_False) | (x == Py_None)) return 0;
|
|
else return PyObject_IsTrue(x);
|
|
}
|
|
|
|
static INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
|
|
PyNumberMethods *m;
|
|
const char *name = NULL;
|
|
PyObject *res = NULL;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (PyInt_Check(x) || PyLong_Check(x))
|
|
#else
|
|
if (PyLong_Check(x))
|
|
#endif
|
|
return Py_INCREF(x), x;
|
|
m = Py_TYPE(x)->tp_as_number;
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (m && m->nb_int) {
|
|
name = "int";
|
|
res = PyNumber_Int(x);
|
|
}
|
|
else if (m && m->nb_long) {
|
|
name = "long";
|
|
res = PyNumber_Long(x);
|
|
}
|
|
#else
|
|
if (m && m->nb_int) {
|
|
name = "int";
|
|
res = PyNumber_Long(x);
|
|
}
|
|
#endif
|
|
if (res) {
|
|
#if PY_VERSION_HEX < 0x03000000
|
|
if (!PyInt_Check(res) && !PyLong_Check(res)) {
|
|
#else
|
|
if (!PyLong_Check(res)) {
|
|
#endif
|
|
PyErr_Format(PyExc_TypeError,
|
|
"__%s__ returned non-%s (type %.200s)",
|
|
name, name, Py_TYPE(res)->tp_name);
|
|
Py_DECREF(res);
|
|
return NULL;
|
|
}
|
|
}
|
|
else if (!PyErr_Occurred()) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"an integer is required");
|
|
}
|
|
return res;
|
|
}
|
|
|
|
static INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
|
|
Py_ssize_t ival;
|
|
PyObject* x = PyNumber_Index(b);
|
|
if (!x) return -1;
|
|
ival = PyInt_AsSsize_t(x);
|
|
Py_DECREF(x);
|
|
return ival;
|
|
}
|
|
|
|
static INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
if (ival <= LONG_MAX)
|
|
return PyInt_FromLong((long)ival);
|
|
else {
|
|
unsigned char *bytes = (unsigned char *) &ival;
|
|
int one = 1; int little = (int)*(unsigned char*)&one;
|
|
return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
|
|
}
|
|
#else
|
|
return PyInt_FromSize_t(ival);
|
|
#endif
|
|
}
|
|
|
|
static INLINE size_t __Pyx_PyInt_AsSize_t(PyObject* x) {
|
|
unsigned PY_LONG_LONG val = __Pyx_PyInt_AsUnsignedLongLong(x);
|
|
if (unlikely(val == (unsigned PY_LONG_LONG)-1 && PyErr_Occurred())) {
|
|
return (size_t)-1;
|
|
} else if (unlikely(val != (unsigned PY_LONG_LONG)(size_t)val)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"value too large to convert to size_t");
|
|
return (size_t)-1;
|
|
}
|
|
return (size_t)val;
|
|
}
|
|
|
|
|
|
#endif /* Py_PYTHON_H */
|